Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0853 ATGCACAATCCCTTCGCCCTTTTCCTCTTCCTCCTTCTCCTCCCTTCAGCAAAACCAGATCTTTCTTCAGAACGCGCCGCCTTACTCCACCTCCGCTCCTCCGTCGGCGGCAGAACCCTTTTCTGGAACGCCACCAACCAAAGCCCATGCAACTGGGCCGGTGTCCAATGCGACCACGACCATGTTGTCGAGCTCCACCTCCCCGGAGTTTCACTTTCCGGCCAACTACCCACCGGAATATTCTCCAACTTAACCCACCTCCGTACCCTCAGTCTCCGTTTCAATGCCCTTACCGGTCACATTCCTTCGGATCTTGCTTCATGCACCAACCTAAGGAACCTTTACTTGCAGAGAAACCTTTTCTCTGGTTCAATCCCTGATTTTCTGTTCAGTTTAACCGATTTGGTTCGGGTTAATTTGGGGTTTAATAACTTCTCGGGTCAGTTCTCGACCGGGTTTAATAACTTGACTCGGTTGAGGACTTTGTTTCTTGAGAATAACCAGCTTCAAGGTTCTATACCTGATTTGAGCAACGTTGTTAATCTTGAACAGTTTAATGTTTCTAATAATTTGTTGAATGGGTCTGTGCCTTTAAAGTTGGGAACTTTTAGTGAAGATTCGTTTTTGGGTAACTCACTTTGTGGGAAACCACTTGGTTTGTGTGCTGGTGATGATGGAAATGGGAGTGGAAGTGTTCCGGGTGAAATTGAGATCAATGGGGGGAAGAAGAAGAAGACGAAGAAGTTATTGGGTGGTGCTATTGCAGGAATTGTAATTGGATCTGTGGTGGGTCTTTTGTTGGTTGTGTTTGTTTTGATTCTTTTGTGTAGGAAGAAGAGTAGCAGCAAGAAAACAAGTTCTGTTGATGTAGCAACCGTTAAGGATCGCGAATTGGAGGTCAATGGTGGTGAGAATAAGGTTAATGATGTGGAGAATGGTGGTCATGGGAATGGGAATGGTAATGGAAATGGGTATTCCGTGGCTGCAGTGGCGGCTGCAGCGTTGACAGGGAATGGGAACAAGGGTGGTGAGGTTGTTAATGCTGGTGGAGCGAAAAAGTTGGTGTTTTTTGGGAATTCGGTAAGAGGGTTTGATTTGGAGGATTTGTTGAGAGCTTCTGCTGAAGTTTTGGGGAAGGGGACTTTTGGGACGGCGTATAAGGCAGTTTTGGAGGTTGGTCCGGTTGTGGCTGTGAAAAGGTTGAAGGATGTGACCATTTCTGAGAAGGAGTTTAAGGAGAAGATTGAAGTGGTTGGAGCAATGGATCATGAGAGTTTGGTTCCTCTCAGGGCTTACTATTTTAGCAGGGATGAGAAGCTTCTTGTGTATGATTACATGTCAATGGGAAGCTTGTCTGCACTTTTGCATGGAAACAAAGGAGCAGGTAGGACACCATTGAATTGGGAACTCAGATCAGGCATTGCACTTGGAGCTGCACGCGGCATTGAGTACCTACATTCACAAGGGCCTAATGTTTCTCACGGAAATATAAAATCATCTAATATCCTCTTAACCAAATCATATGAAGCAAGAGTATCGGATTTTGGCCTTGCACACCTGGTTGGCCCCTCTTCTACCCCCAATCGCATTGCCGGCTACCGCGCGCCTGAGGTAACCGATCCTCGCAAAGTATCTCAAAAAGCAGACGTGTACAGTTTTGGTGTATTTCTCTTGGAGCTTCTAACCGGGAAAGCACCGACTCATGCTCTCCTAAACGAAGAAGGAGTAGACCTCCCTAGATGGGTGCAATCTGTTGTTAGAGAAGAGTGGACTTCCGAGGTTTTCGATCTTGAACTCCTTAGGTATCAGAATGTTGAAGAGGAGATGGTTCAGTTGTTGCAGCTTGCAGTTGATTGTACAGCATCGTACCCCGATAAACGCCCTTCAATGTCCGAAGTAACACAAAGTATTGAAGAGTTACATCGTTCTAGCTTGAAAGATGATCAGGACCAAATCCAACATCATGATCTCATCAATGATATATAG 1986 0.4587 MHNPFALFLFLLLLPSAKPDLSSERAALLHLRSSVGGRTLFWNATNQSPCNWAGVQCDHDHVVELHLPGVSLSGQLPTGIFSNLTHLRTLSLRFNALTGHIPSDLASCTNLRNLYLQRNLFSGSIPDFLFSLTDLVRVNLGFNNFSGQFSTGFNNLTRLRTLFLENNQLQGSIPDLSNVVNLEQFNVSNNLLNGSVPLKLGTFSEDSFLGNSLCGKPLGLCAGDDGNGSGSVPGEIEINGGKKKKTKKLLGGAIAGIVIGSVVGLLLVVFVLILLCRKKSSSKKTSSVDVATVKDRELEVNGGENKVNDVENGGHGNGNGNGNGYSVAAVAAAALTGNGNKGGEVVNAGGAKKLVFFGNSVRGFDLEDLLRASAEVLGKGTFGTAYKAVLEVGPVVAVKRLKDVTISEKEFKEKIEVVGAMDHESLVPLRAYYFSRDEKLLVYDYMSMGSLSALLHGNKGAGRTPLNWELRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYEARVSDFGLAHLVGPSSTPNRIAGYRAPEVTDPRKVSQKADVYSFGVFLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCTASYPDKRPSMSEVTQSIEELHRSSLKDDQDQIQHHDLINDI* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0853 661 CDD STKc_IRAK 377 640 - -
Lan17g0853 661 Pfam Protein kinase domain 374 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0853 661 ProSiteProfiles Protein kinase domain profile. 371 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0853 661 Pfam Leucine rich repeat 65 120 IPR001611 GO:0005515
Lan17g0853 661 SUPERFAMILY L domain-like 37 202 - -
Lan17g0853 661 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 4 661 - -
Lan17g0853 661 ProSiteProfiles Leucine-rich repeat profile. 158 180 IPR001611 GO:0005515
Lan17g0853 661 PANTHER OS05G0588300 PROTEIN 4 661 - -
Lan17g0853 661 Gene3D Ribonuclease Inhibitor 23 132 IPR032675 -
Lan17g0853 661 Pfam Leucine rich repeat N-terminal domain 22 58 IPR013210 -
Lan17g0853 661 Gene3D Ribonuclease Inhibitor 134 221 IPR032675 -
Lan17g0853 661 Gene3D Phosphorylase Kinase; domain 1 344 445 - -
Lan17g0853 661 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524
Lan17g0853 661 Gene3D Transferase(Phosphotransferase) domain 1 446 660 - -
Lan17g0853 661 SUPERFAMILY Protein kinase-like (PK-like) 375 636 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0853 Lan-Chr17 10732784 10735523 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0853 20 656 Receptor kinase-like Gene Family AT1G48480 63.256 0.0 790
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan17g0853 Pkinase 9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0853 - - gmx:100818955 896.73