Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0850 ATGAGCTTGCAAGTTCGAAACCAAAGGAGGGATAGGTCGAGGGTCCCTGCCCAAGCTGCTCGTCAGGAATGGATTCCTAGAGCATCCACCACCACCACTGCTATTGCTGCCACAGACCAGCCATCCAATTCACTGTTAGATTACCAGAATGGCGATTCTGGCATCTCCAATCATAGTATTCTTGGTCCGCCAACCAGCCAGCATAGAAGCAATGGTCCGCCAACCAGCCAGCATAGAAGCAATGGTCCGCCAACGAGCCAGCATATCAGCATTGGTCCGCCAACCAGCCAGCATATCAGCATTGGTCCGCCAACCAGCCAGCATAGAAGCAATGGTCCGCCAACCAGCCAGCATAGAAGCATTGGTCCGCCAACGAGCCAGCATATCAGCATTGGTCCGCCAACGAGTGAGCATATCAGCATTGGTCTGCCGACGAGTCAGAATAGAAGCATTGGTCCGCCAACGAGTCAGCATAGAAGTATTGGCACACCAGCAAATCAGTATAGAAGTAATCATGGTTCAAGGAGTGATGAGAGTCGTCCTGTGAATCAGAGAAGAGAAAAGGAAAAACGTGGAAGTGAGAAACATGTTGGGAGGGGATTACGGGACTCTAATTTACCTCAGCTGCTGCAAGAGATTCAGGAGAAGCTCATGAAAGGTGCCATTGAATGCATGATTTGCTATGACAATGTCCGGAGATCTGCACCTATCTGGTGTTGCTCAAGTTGTTACTCTATCTTTCACCTGAATTGTATCAAGAAGTGGGCCCGTGCACCGACTTCAGTCGATTTGACTGCTGATAAGAATCAAGGGTTTAATTGGCGGTGTCCTGGTTGTCAGTCTGTGCAGCACACATCGTCGAGGGAGATTAGATATGTTTGCTTTTGTGGAAAGAGGCCAGACCCACCATCTGATTTGTATCTGACACCACATTCATGTGGAGAACCATGTGGGAAGCCTCTTGAGAGGGAGGTTTTGGTTACTGGAGGGAGCAAGGATGACCTCTGCCCTCATGCTTGTGTCTTGCAATGCCATCCTGGTCCGTGTCCTCCTTGCAGAGCATTTGCCCCACCATGTTTGTGTCCTTGCGGGAAGAAAAAAATTACTACTCGTTGCTCAGACCGGCAGTCTGTTCTTACATGTGGCCAGCGCTGTGAGAAGCTTCTTGAATGTGGGCGGCATCAGTGTGAGCGCATTTGTCATGTGGGCCCTTGTGATCCTTGTCAGGTTCTAATCAATGCCTCTTGCTTTTGTAGTAAAAAGATGGAGGTTATTCTTTGTGGAGACATGACTGTGAAGGGTGAATTCAAAGCAGAAGGTGGAGTTTTTTCTTGTGGTTCCAATTGTGGAAAGAAACTTAGTTGTGGTAATCATGCCTGTATTGAGACTTGTCATCCAGGCATCTGTGGGGAATGTGACTTGTTGCCAAGCCAGATTAATACGTGTTGTTGTGGGAAGAATAGACTGGAGGAGGAGCGGCAGAGTTGTTTGGACCCGATACCTACCTGTTCACAAGTCTGTGGCAAGTCCCTTCCTTGTGGGATACATCATTGTAAAGAGGCATGTCATGCTGGGGATTGCTCACCTTGTTTGGTTCTTGTCTCCCAGAAGTGTCGGTGTGGCTCAACTTCCCGAAGTGTGGAATGCTACAAGACAACAATGGAGAATGAGAAATTTACTTGTGAAAAGCCTTGTGGGCAGAAGAAGAATTGCGGAAGGCATCGATGTAGTGAACGGTGTTGTCCACTTTCTAATCCAAACAAGAATCTAAGTGAGGATTGGAATCTTCACTTCTGTTCTGTGGCATGCGGAAAGAAGTTAAGGTGTGGGCAGCATGTGTGTGAATCCCTGTGTCACAGTGGTCATTGTCCACCTTGTCTGGAAACTATATTCACTGATTTGACATGTGCTTGTGGTAGGACTTCAATCCCTCCTCCACTGCCTTGTGGCACACCACTTCCCTCATGTCAGCTTCCGTGTTCAGCTCCTCAACCTTGTGGCCATCCACCCTCCCACAGCTGCCATTTTGGAGATTGCCCTCCTTGTTCAGTGACAGTAGCGAAAGAATGTATTGGTGGGCATGTTGTTCTTAGGAACATACCTTGTGGTTCAAAGGAAATTAGATGCAATAAGCTCTGCGGGAAGACCAGACAGTGTGGTTTACATGCTTGTGGCAGAACATGTCACGCTGCACCATGTGATAATCCATCTTCTATGGAAGGTTCCCGAGCTTCTTGTGGGCAAACATGTGGTGCTCCAAGGAGAGATTGCCGGCATACATGTACAGCTCGCTGTCACCCTTCATCCACATGTCCAGATATAAGATGTGAGTTCCCTGTCACAATTACTTGTTCTTGTGGCCGTATAACAGCAAATGTCCCCTGTGATGCTGGTGGTAGCAGCAATAACTACAATGCTGATGCTGTGCATGAAGCTTCCATTATTCAGAAGTTGCCTGCGCAGCTTCAACCGGTGGATGCAAATGGAAAAAAAGTTCCCCTTGGACAAAGAAAGCTGATGTGTGATGATGAGTGTGCTAAGTTGGAGCGCAAAAGGGTTCTTGCAGATGCTTTTGAGATAACCCCTCCAAATCTGGATTTTCTCCATTTTAGTGAGAACTCGGTTGCCTCTGAATTGCTTTCTGATATGTTGAGACGTGATCCCAAATGGGTTTTATCTATTGAAGACAGATGCAAGTTTTTAGTGCTTGGCAAGAGCAAAGGAATTACACATGGTCTAAAAGTCCATGTCTTCTGTCCTATGCTAAAGGAAAACAGAGATGCAGTGAGGGTGATAGCTGAGAGATGGAAGCTTACAGTGAATGCTGCTGGTTGGGAGCCAAAGCGTTTCGTAGTTGTCCATGTTACCCCAAAATCAAAGGCTCCAGCTCGTGTGCTAGGGGTCAAGGGTACTACAACCATAAACACACCCCTTCCTCCTGCATTTGATCCTTTGGTAGACATGGATCCTCGACTTGTTGTTTCCTTCCTAGACTTACCAAGGGATGCAGATATTAGTGCGTTGGTGTTGAGATTCGGTGGTGAGTGTGAACTTGTTTGGTTAAATGATAAAAATGCATTGGCTGTTTTTCATGATCCTGCTCGAGCAGCAACTGCGATGAGGAGGTTGGATCATGGCTCCATTTACAATGGAGCTGTTTCATATGCCCCAAATGTTGGTACATCGGTGGCTTCTTCAGCTACCAATGCCTGGGGAGGAGCCGGAACAATGAAAGATGGAGCAGCGGCGGCATTGAAAGGTAATCCGTGGAAAAAGGCTGTTGTTCAAGAGGCAGGTTGGATAGATGATTCTTGGGGCGACGGAGAGTGGGCCACCACCGGTTCTGCTATTGTCCAGCCACCATCTGTTTGGAAGAAAGAAGCCCCCATTGCTGCTTCATTGAATCCTTGGAGTGTCTTAGATCAAGAATCATCCTCAAGTTCATCAGGTGCAGCTGCTAAAACTGACGTTTCTAAGAAACAGGGTGAAAATAGTGCAGTGCCAAAGTTGGAGCCTCATTCTGGTAGCTCAATTCTTGAAGGACAGCTTGGAGGAAACTTTGATGCATCAAATGTTTCTGATGTAGTAGATGATTGGGAGAAGGCCTATCTTGTCTTTCAGTTTTTTTGTGAAAACATGGTTAATAACTAAATAATTTCTGTGCCCATATTATCATTACAGAAGAAAAAATGGAAACAAAGAATCCTCATGACATTTCAAATTGTTGGAGTAGTTTATGGTCAACTGAGCACTGCACCATTGTATGTGTTCGGGACAATGAGAATCGAAGATCTTGTTACTGAGGAAATCGTATATGAACTCTTCTCCTTCATTTTCTGGACTCTGACCATCATTGCTTTGCTGAAATATACTTTTATAGTGCTCAAAGCTGATGATGAAGGAGAGGGTGGTACTTTTGCTTTATACTCACTGTTGTGTAGAAATGCAAAAGTTGGCTTGCTTCCATGTGATAGAAGCACCAATGAGGTTATGCTTTGTGAAGAGACAAGTCCTTCTAAGAACAATGCCGATTCAAGAGCACGAAGAGCCATTGAGAAGCACAAGATCTGTCACTATCTAATACTGTTCTTAGCGCTCTTCGGTTCCTGTATGACAATTGGTGAGGCAGTGCTTACTCCAGCACTTTCAGTGTTATCAGCTTCAACTGGTGTTCAGAGATCCTTGTCAGATATGGTACACACATTTTCCTCATCACACCATACTCAGGAGTCTGTATCAAAGGCTCTAAAAAGATATGTACCTGTTCCCTCTGCATGTGCTATATTGGTTGGCCTGTTCACGCTGCAGCGCTGTGGGACACGTAAAATCGGATTCATGTTTGCTCCAATTATTGCTGTTTGGCTGTTGTTTGTTAGTGTGGTGGGCGTGTACAACATTTTCTACTGGGATGCAAAAATCATCTGTAAAATATCCCCAGTATACATGTTCAAATTCATCAGTAATATTGACTTTAGCAGATGGAGGTTATTAGGAAGCGTCATTTTATGTGTAGCAGGATCAGAGGCAATGTTCGCGGACCTAGGCCATTTCACGAAGAAATCAATTGAGATTGCATTCATATGCTTGATCTATCCGCTTCTTATTTTATGCTATGCCGGTCAAGCTGCATATATCTCGAAAAATTTACATGCTCCTGATTTTAATCATCTTAGTCAATCTATGCCAAGTCATTTCAAACATGTGTTCATAGTACTATCTCTACTTGCTTCAGCTGTCGGAAGCCAAGCAGCGATAACAGCGTGTTTCTCCATCATTAAACAGTGTCTGGCATTGAACTGTTTTCCGAGAGTGAAAATTATTCACACATCAAAAACAATACATGGCCAGATTTACATCCCTGATGTCAATTGGTTATTGATGATTCTCAGTCTCACTGTCACAATTGGTTTTAGAGACATTGTAAAGATCGGCAACGCAACAGGTTTGGCTATAATCTGTGGAATGCTTGTAACAACTAGTCTGATGTCACTAATCATTGCTTTATATTGGGAGAGGAATTTGATTCTATCCGCATGTTTTCTCCTATGTTTTGGCTTTCTTGAGGTTGCATATCTTTCAGCATGTCTGCTACAAATTCACAAGGGAGCTTGGTATCTAGTTGTCCTTTTGGTGGTGTCCATGACAATAATGCTTTCATGGCACTATGGAACTATGAAGAAGTACGAGTTCGATTTAGAAAACAAGGTGTCGACTGAATGGCTAATAGATGTTAGTCCAGGCCTTGGGATTTCCCGGGTACCGGGAATTGGCTTCATTTACACTGACATAGTAACAGGAATCCCAGCTTTCTTTTCACATTTCATCACTAATCTTCCTGCATTTCATCAAGTGTTGATCTTGGTGTCCTTCAAGTCTATACCGGTGCCTTATGTCCCCGAAAGTGAAAAGTATCTCATAGGTAGGATTGGACCAAAAGATTATAAAATCTATCGTTGCATCGTCAGATATGGATATTGCGATCTTTCAAGGGATGTAGGCGATTTTGAGGAGCAGATTATTCGGTCTATAGGCGAATTCATCTCCATTGAGAAAAGTGACATTGAATCCATGGTTTCACCACATGAAAGAATGATAGTTGTTGGAAATCCTTCACCAGATAGTAATGCTTTAGTTCCTCTTGATGAGGGTGACTCGTGCATGGGGCCTAGTGCGGTGAGTCATGAATCTCAGATAAGTCCTATAGGCAATGAATATCAGATATGTGATACATTGGAAACTTCGACTCGGCCTAACAAGCGAAAGAAGGTGAGATTTGTGTTGCCTGCTAATAGTCCTAAAATGCAAACATCTGTGAGGGAAGAGCTCACAGAGCTAATTGAAGCAAGGGAGAGTGGTAGTGCCTATTTCTTAGGACAGTCACATTTAGTGGTGCGCGATGGCTCAAACTTTCTCAAGAGATTCTTAATCATGGTCTATCGATTTAGCGAAAAAAATTGTCGAGAGCCTCCGGTAGCTCTTAAAATTCCTCATGCTGCTCTTGTAGAAGTTGGTATGGTGTGTACTATATAA 6030 0.4446 MSLQVRNQRRDRSRVPAQAARQEWIPRASTTTTAIAATDQPSNSLLDYQNGDSGISNHSILGPPTSQHRSNGPPTSQHRSNGPPTSQHISIGPPTSQHISIGPPTSQHRSNGPPTSQHRSIGPPTSQHISIGPPTSEHISIGLPTSQNRSIGPPTSQHRSIGTPANQYRSNHGSRSDESRPVNQRREKEKRGSEKHVGRGLRDSNLPQLLQEIQEKLMKGAIECMICYDNVRRSAPIWCCSSCYSIFHLNCIKKWARAPTSVDLTADKNQGFNWRCPGCQSVQHTSSREIRYVCFCGKRPDPPSDLYLTPHSCGEPCGKPLEREVLVTGGSKDDLCPHACVLQCHPGPCPPCRAFAPPCLCPCGKKKITTRCSDRQSVLTCGQRCEKLLECGRHQCERICHVGPCDPCQVLINASCFCSKKMEVILCGDMTVKGEFKAEGGVFSCGSNCGKKLSCGNHACIETCHPGICGECDLLPSQINTCCCGKNRLEEERQSCLDPIPTCSQVCGKSLPCGIHHCKEACHAGDCSPCLVLVSQKCRCGSTSRSVECYKTTMENEKFTCEKPCGQKKNCGRHRCSERCCPLSNPNKNLSEDWNLHFCSVACGKKLRCGQHVCESLCHSGHCPPCLETIFTDLTCACGRTSIPPPLPCGTPLPSCQLPCSAPQPCGHPPSHSCHFGDCPPCSVTVAKECIGGHVVLRNIPCGSKEIRCNKLCGKTRQCGLHACGRTCHAAPCDNPSSMEGSRASCGQTCGAPRRDCRHTCTARCHPSSTCPDIRCEFPVTITCSCGRITANVPCDAGGSSNNYNADAVHEASIIQKLPAQLQPVDANGKKVPLGQRKLMCDDECAKLERKRVLADAFEITPPNLDFLHFSENSVASELLSDMLRRDPKWVLSIEDRCKFLVLGKSKGITHGLKVHVFCPMLKENRDAVRVIAERWKLTVNAAGWEPKRFVVVHVTPKSKAPARVLGVKGTTTINTPLPPAFDPLVDMDPRLVVSFLDLPRDADISALVLRFGGECELVWLNDKNALAVFHDPARAATAMRRLDHGSIYNGAVSYAPNVGTSVASSATNAWGGAGTMKDGAAAALKGNPWKKAVVQEAGWIDDSWGDGEWATTGSAIVQPPSVWKKEAPIAASLNPWSVLDQESSSSSSGAAAKTDVSKKQGENSAVPKLEPHSGSSILEGQLGGNFDASNVSDVVDDWEKAYLVFQFFCENMVNN*IISVPILSLQKKKWKQRILMTFQIVGVVYGQLSTAPLYVFGTMRIEDLVTEEIVYELFSFIFWTLTIIALLKYTFIVLKADDEGEGGTFALYSLLCRNAKVGLLPCDRSTNEVMLCEETSPSKNNADSRARRAIEKHKICHYLILFLALFGSCMTIGEAVLTPALSVLSASTGVQRSLSDMVHTFSSSHHTQESVSKALKRYVPVPSACAILVGLFTLQRCGTRKIGFMFAPIIAVWLLFVSVVGVYNIFYWDAKIICKISPVYMFKFISNIDFSRWRLLGSVILCVAGSEAMFADLGHFTKKSIEIAFICLIYPLLILCYAGQAAYISKNLHAPDFNHLSQSMPSHFKHVFIVLSLLASAVGSQAAITACFSIIKQCLALNCFPRVKIIHTSKTIHGQIYIPDVNWLLMILSLTVTIGFRDIVKIGNATGLAIICGMLVTTSLMSLIIALYWERNLILSACFLLCFGFLEVAYLSACLLQIHKGAWYLVVLLVVSMTIMLSWHYGTMKKYEFDLENKVSTEWLIDVSPGLGISRVPGIGFIYTDIVTGIPAFFSHFITNLPAFHQVLILVSFKSIPVPYVPESEKYLIGRIGPKDYKIYRCIVRYGYCDLSRDVGDFEEQIIRSIGEFISIEKSDIESMVSPHERMIVVGNPSPDSNALVPLDEGDSCMGPSAVSHESQISPIGNEYQICDTLETSTRPNKRKKVRFVLPANSPKMQTSVREELTELIEARESGSAYFLGQSHLVVRDGSNFLKRFLIMVYRFSEKNCREPPVALKIPHAALVEVGMVCTI* 2010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0850 2008 TIGRFAM kup: potassium uptake protein 1236 2008 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lan17g0850 2008 MobiDBLite consensus disorder prediction 1143 1162 - -
Lan17g0850 2008 CDD NF-X1-zinc-finger 599 651 - -
Lan17g0850 2008 SMART znfxneu3 571 601 IPR000967 GO:0005634|GO:0008270
Lan17g0850 2008 SMART znfxneu3 513 532 IPR000967 GO:0005634|GO:0008270
Lan17g0850 2008 SMART znfxneu3 609 628 IPR000967 GO:0005634|GO:0008270
Lan17g0850 2008 SMART znfxneu3 719 748 IPR000967 GO:0005634|GO:0008270
Lan17g0850 2008 SMART znfxneu3 336 354 IPR000967 GO:0005634|GO:0008270
Lan17g0850 2008 SMART znfxneu3 391 410 IPR000967 GO:0005634|GO:0008270
Lan17g0850 2008 SMART znfxneu3 455 474 IPR000967 GO:0005634|GO:0008270
Lan17g0850 2008 SMART znfxneu3 666 684 IPR000967 GO:0005634|GO:0008270
Lan17g0850 2008 SMART znfxneu3 757 778 IPR000967 GO:0005634|GO:0008270
Lan17g0850 2008 Coils Coil 2008 2008 - -
Lan17g0850 2008 ProSiteProfiles Zinc finger PHD-type profile. 221 282 IPR019787 -
Lan17g0850 2008 CDD NF-X1-zinc-finger 746 795 - -
Lan17g0850 2008 CDD NF-X1-zinc-finger 503 551 - -
Lan17g0850 2008 CDD NF-X1-zinc-finger 313 374 - -
Lan17g0850 2008 Pfam NF-X1 type zinc finger 666 683 IPR000967 GO:0005634|GO:0008270
Lan17g0850 2008 Pfam NF-X1 type zinc finger 455 472 IPR000967 GO:0005634|GO:0008270
Lan17g0850 2008 Pfam NF-X1 type zinc finger 338 353 IPR000967 GO:0005634|GO:0008270
Lan17g0850 2008 Pfam NF-X1 type zinc finger 391 409 IPR000967 GO:0005634|GO:0008270
Lan17g0850 2008 Pfam NF-X1 type zinc finger 719 734 IPR000967 GO:0005634|GO:0008270
Lan17g0850 2008 Pfam NF-X1 type zinc finger 609 626 IPR000967 GO:0005634|GO:0008270
Lan17g0850 2008 Pfam NF-X1 type zinc finger 571 582 IPR000967 GO:0005634|GO:0008270
Lan17g0850 2008 Pfam NF-X1 type zinc finger 513 530 IPR000967 GO:0005634|GO:0008270
Lan17g0850 2008 Pfam K+ potassium transporter 1238 1825 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lan17g0850 2008 CDD NF-X1-zinc-finger 445 490 - -
Lan17g0850 2008 MobiDBLite consensus disorder prediction 1 201 - -
Lan17g0850 2008 ProSiteProfiles Zinc finger RING-type profile. 224 280 IPR001841 -
Lan17g0850 2008 MobiDBLite consensus disorder prediction 173 201 - -
Lan17g0850 2008 CDD NF-X1-zinc-finger 709 766 - -
Lan17g0850 2008 SUPERFAMILY RING/U-box 214 284 - -
Lan17g0850 2008 MobiDBLite consensus disorder prediction 1143 1174 - -
Lan17g0850 2008 CDD RING-CH-C4HC3_NFX1 223 280 - -
Lan17g0850 2008 PANTHER NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 194 1201 - -
Lan17g0850 2008 CDD NF-X1-zinc-finger 656 704 - -
Lan17g0850 2008 PANTHER NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 194 1201 IPR034078 GO:0003700
Lan17g0850 2008 MobiDBLite consensus disorder prediction 24 172 - -
Lan17g0850 2008 CDD NF-X1-zinc-finger 381 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0850 Lan-Chr17 10651945 10662842 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0850 1224 2008 Inorganic Solute Cotransporters AT2G40540 46.202 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-X1 Lan17g0850 K_trans 3.5e-150 CL0062
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0850 K12236 - jre:108980400 2773.04