Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0846 ATGGAAGGAGGAGGACCAGACAACTCCAATTCTGTATATAGAGAGTGTTTGAGAAACCATGCAGCCAGCCTTGGGAGCTATGCTACCGATGGTTGTGGAGAGTTTACGGTGGACAACATGTCACCCGGAAGCCTACAATGTGTAGCTTGTGGGTGTCATCGTAACTTCCACCGTAAACTCAAATATCCTCTAGTAGGGCATAGAGGGCTAATTAGCTATACCACCAGCCGTGGTCTAGAACATCCCGAGACCACGACTGACATGATAGACTATTCTGGTGGTGGTGGTGATGGTAGCGATGGGAGATTGTTGGAGTTAGACGGAAGCGGGAAGAAGCGATTCCGGTCCAAATTCACGGTAGATCAGAAGGAGAAGATGCTGGCTTTTGCTGAGAAGCTAGGGTGGAAGCTGCAGAGGAAGGATCTTGATGAAGAGATAGAGAGGTTTTGTAGAAGTATTGGAGTGAGTAGACAAGTGTTCAAAGTGTGGATGCATAACCATAAGAACTCTTCTTCCTCATCTTCTGCATCTAATGGCAATGTGTCCTCTCTCACTCAGTAA 561 0.4706 MEGGGPDNSNSVYRECLRNHAASLGSYATDGCGEFTVDNMSPGSLQCVACGCHRNFHRKLKYPLVGHRGLISYTTSRGLEHPETTTDMIDYSGGGGDGSDGRLLELDGSGKKRFRSKFTVDQKEKMLAFAEKLGWKLQRKDLDEEIERFCRSIGVSRQVFKVWMHNHKNSSSSSSASNGNVSSLTQ* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0846 186 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 13 60 IPR006456 -
Lan17g0846 186 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 11 8 177 - -
Lan17g0846 186 Pfam ZF-HD protein dimerisation region 12 60 IPR006456 -
Lan17g0846 186 Gene3D - 98 175 - -
Lan17g0846 186 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 13 59 IPR006456 -
Lan17g0846 186 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 111 169 IPR006455 -
Lan17g0846 186 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 8 177 - -
Lan17g0846 186 SUPERFAMILY Homeodomain-like 102 169 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0846 Lan-Chr17 10561888 10562644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0846 13 170 ZF-HD Transcription Factor Family AT4G24660 45.833 2.57e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lan17g0846 ZF-HD_dimer 1.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0846 - - qsu:112019750 251.136