Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0845 ATGATGGCAGAAACAAACTCGGTTGATGTGATTTTGGACTTTCTGAGGAAGAACCGATTTACTAGAGCTGAGGCAGCTTTGCGTAGTGAGATCAATAACCATCCAGACTTAAATGGCTTCTTTCAGAAACTTACATTGGAAGAAAAGGCCTCACGTGACACACCACAAAATGATAAGGGGAAGCTGGCTGTAGAGATCCAAGGGGCAGATTCTCGTGAAAGTGAAGTTTCTAAAGAACTGATTGTGAAGGAAATAGAATGTGGGGCTAGTAGAAGTGCATCTGAAACCAAATGGAAAACTTCTGCTCCTTCTATAAGTGAACGGAATAAATCGATTGGGACGAGTGACAAACACTTCACTTTCTCTAAGAGTCCAGAGGACAGTATGCTAGATTTATACTCACTGAAGTCCAATCCTAGCAATGGTCCTGCGGATCCGTACCAAAATGATACTGGTAGTAGGGCTAATAATACTTTAAAGGCTTCTGTATCTCAACAGTCAAAATATCAAACTAACGAAGATGCTTCTGTATCTGCAACCAATAGTAATGCTAAGTCTGGTGAGGAAAGTACTCTGCTTGCAGCTAATAAACCCTTGTGGCTTGGAAGTAGTATTAAAGCATCTGTGGAACCAAAGTATGACCTTGTGGCACAAAGCAAAGAACCAAGGGAACATGATCGCCAACTAAAATTTAATAGTTCAGCTCTTAAAATCAACTTTTCAGACAATCCCTGGTCTAGAGCTGATGAGAATGCGAACTCATCTTCAGACCCATGGAATTGTTCTGTCAAGACTGTTTTTCCCTTCCCAAAGGGGGACATGCCTACAAGCTTTGATGGCACAATTTATTCTGACAAAAATGAGGAAAAAAGGTTAGAAATTAGTGATACTAGGGCATCTATAAAAGAGCAGGTGGATGAAGTAGGGAGAGCTATTTTCTTGGGCAAGTCACAAGGAAGTTCCGAACTGAAGATAATTAGCAGTTCAAGTTTTCCTCTTGTGTATGAAAATCAGAGGGAAGAGTTTCCTAGGCTTCCTCCTGTTAAACTCAAGCCAGAAGATAAGCCCTTGCCTGTTAAGTGGGAGGAGAAGTTTGAGCGAGATGGACCAACTTCGAAATTCTCTGGTGGCGACAGCACTTTATATATAGGTTCATATCTGGATGTGCCAATCGGGCAAGAAATTAACCCTTCAGGTATGAAGAGGGCTACAGGGGGAAGCTGGTTATCTGTGAGTCAAGGGATAGCAGAGGACACATCTGATCTTGTATCGGGTTTTGCAACAATTGGTGATGGGTTGAATGAATCTGTCGACTATCCGAATGAATATTGGGACTCTGATGAGTATGATGATGATGATGATATTGGGTATATGAGACAACCTATTGAAGATGAAGCCTGGTTTTTGGCGCATGAAATCGACTATCCTAGTGACAATGAAAAGGGGACTGGGCATGGAAGTGTTCCAGATCCTCATGAAAGAGGTCCAGCCAAAGATGAGGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTCTCTGGAGAGCGATATCTTCAAGTGAGTAATGTTGAACCAGTCACAGCTTCAGATGATCCCATTGGTCTAATAGTTACTGAAATGTATGGAAGTACCAATGATAATGATTTAATGGCTCAATACGATGGACAATTGATGGATGAAGAAGAATTAAGTCTAATGCGTGCGGAACCGGTCTGGCAAGGCTTTGTCAGTCAGTCAAATGAACTCATCATGCTAGGAGATGGGAATGTTTTGGATGATAGGGTGAGATCACGGCTAGAGAATATTCGTATGGATGATGATCAACATGGTTCGGTTAGGTCTATTGGGGTGGGGATCAACAGTGATGCTGCAGATATTGGTAGTGAGATGCACGAAACTTTGGTTGGTGGTAGTAGTGAAGGGGATCTAGAATATTTCCGAGATCGTGATGTTGGGGTTGGTGGCTTCAAACACTCACATCATAATTTGGATAAGAGTTCTATTAGTAAATCAAACAAAAATAAGAAGAAAAATGACAACAGTGAGTCAAATAAATATGCCAAAGGGGGTGGTAAGGATGCACAGTTGCAGATGAAAACACATGGTGATGGGAACTTCTCATTTCCTCTATCTTCGAAAGATGGCCAGATGGCTGAGGCTTCCTCTAAACAGTCCCTGTGGTCAAATAACTGCAATGCAGATGAAACTGATGAATGTCTTAATGCATTTGAGGGATCAGATGACATGCTTGCTTTATGGAAGCAAAAGAGCAGTGATTCTTCACCCATTAAAAGTTCCAGGGATGAAAATAATGCTAACCAAGTAAGATCCAGAAACTCTTCTCCAGCAACAGTGTCAAATTACAGATATTCTGAAAGAGAGCATATCAAGCCAGAAGAGGATGAAAAGGTTGACGCTGCAAGGGAGGATGATCTAGGGGCATCACTAGAGGATGAAGAGGCTGCTGCTGTGCAGGAGCAAGTAAGGCAAATAAAGGCCCAGGAGGAGGAATTTGAAACCTTTGATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGAAGGTATCATGTCACTGAGTATTTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGATCTGCACACAGGCATGGATGTCTGTGTTAAAATTATAAAGAACAACAAGGATTTTTTTGACCAAAGCCTTGATGAAATCAAGCTTCTCAAGTATGTCAATAAGCATGATCCTGGAGACAAGTATCACCTTCTCCGGTTATATGATTATTTCTATTATCGAGAACATTTGTTGATAGTGTGTGAACTACTTAAAGCAAACTTATATGAGTTTCATAAATTCAATAGAGAATCAGGGGGTGAAGTGTACTTCACAATGCCAAGATTGCAGTCAATCACCATTCAATGTTTGGAAGCACTCCAGTTTTTGCATAGCCTCGGACTAATACATTGTGATTTGAAGCCTGAGAATATTTTGGTTAAAAGCTATAGTAGATGTGAGGTGAAGGTCATTGATCTCGGAAGCAGTTGTTTTGAGACAGATCACCTATGCTCTTATGTTCAGTCACGGTCCTATCGTGCCCCTGAGGTTATTTTGGGGCTTCCATATGACAAGAAAATTGATATCTGGTCACTTGGCTGCATCTTGGCTGAACTATGTACTGGCAATGTCCTCTTTCAAAATGATTCACCTGCCACATTACTTGCTCGTGTAATTGGGATCATCGGTCCAATTGATCAAAGTATGCTTGCAAAAGGACGAGATACATATAAGTACTTCACCAAAAATCATATGCTTTACGAACGGAATCAGGAATCCAACAGGTTAGAATACTTGATTTCAAAAAAGACATCTTTGAGGCATAGATTGCCAATGGGAGACCAAGGCTTCATTGACTTTGTTGCTCATTTGCTTGAGATCAATCCAAAGAAGCGGCCTTCGGCATCTGACGCCCTAAAGCACCCGTGGTTATCATACCCTTATGAACCTATATCATCTTGA 3555 0.4113 MMAETNSVDVILDFLRKNRFTRAEAALRSEINNHPDLNGFFQKLTLEEKASRDTPQNDKGKLAVEIQGADSRESEVSKELIVKEIECGASRSASETKWKTSAPSISERNKSIGTSDKHFTFSKSPEDSMLDLYSLKSNPSNGPADPYQNDTGSRANNTLKASVSQQSKYQTNEDASVSATNSNAKSGEESTLLAANKPLWLGSSIKASVEPKYDLVAQSKEPREHDRQLKFNSSALKINFSDNPWSRADENANSSSDPWNCSVKTVFPFPKGDMPTSFDGTIYSDKNEEKRLEISDTRASIKEQVDEVGRAIFLGKSQGSSELKIISSSSFPLVYENQREEFPRLPPVKLKPEDKPLPVKWEEKFERDGPTSKFSGGDSTLYIGSYLDVPIGQEINPSGMKRATGGSWLSVSQGIAEDTSDLVSGFATIGDGLNESVDYPNEYWDSDEYDDDDDIGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPHERGPAKDEDDDQSFAEEDSYFSGERYLQVSNVEPVTASDDPIGLIVTEMYGSTNDNDLMAQYDGQLMDEEELSLMRAEPVWQGFVSQSNELIMLGDGNVLDDRVRSRLENIRMDDDQHGSVRSIGVGINSDAADIGSEMHETLVGGSSEGDLEYFRDRDVGVGGFKHSHHNLDKSSISKSNKNKKKNDNSESNKYAKGGGKDAQLQMKTHGDGNFSFPLSSKDGQMAEASSKQSLWSNNCNADETDECLNAFEGSDDMLALWKQKSSDSSPIKSSRDENNANQVRSRNSSPATVSNYRYSEREHIKPEEDEKVDAAREDDLGASLEDEEAAAVQEQVRQIKAQEEEFETFDLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPGDKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQSMLAKGRDTYKYFTKNHMLYERNQESNRLEYLISKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASDALKHPWLSYPYEPISS* 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0845 1184 Pfam Protein kinase domain 873 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0845 1184 MobiDBLite consensus disorder prediction 475 508 - -
Lan17g0845 1184 MobiDBLite consensus disorder prediction 658 684 - -
Lan17g0845 1184 ProSitePatterns Serine/Threonine protein kinases active-site signature. 999 1011 IPR008271 GO:0004672|GO:0006468
Lan17g0845 1184 MobiDBLite consensus disorder prediction 475 501 - -
Lan17g0845 1184 PANTHER - 3 1182 - -
Lan17g0845 1184 MobiDBLite consensus disorder prediction 756 789 - -
Lan17g0845 1184 Gene3D Transferase(Phosphotransferase) domain 1 927 1175 - -
Lan17g0845 1184 MobiDBLite consensus disorder prediction 131 189 - -
Lan17g0845 1184 SUPERFAMILY Protein kinase-like (PK-like) 862 1177 IPR011009 -
Lan17g0845 1184 MobiDBLite consensus disorder prediction 701 722 - -
Lan17g0845 1184 SMART serkin_6 873 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0845 1184 Gene3D Phosphorylase Kinase; domain 1 867 954 - -
Lan17g0845 1184 PANTHER DUAL SPECIFICITY PROTEIN KINASE 3 1182 - -
Lan17g0845 1184 MobiDBLite consensus disorder prediction 92 189 - -
Lan17g0845 1184 CDD PKc_DYRK_like 873 1175 - -
Lan17g0845 1184 MobiDBLite consensus disorder prediction 658 722 - -
Lan17g0845 1184 ProSiteProfiles Protein kinase domain profile. 873 1175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0845 1184 MobiDBLite consensus disorder prediction 756 806 - -
Lan17g0845 1184 MobiDBLite consensus disorder prediction 791 806 - -
Lan17g0845 1184 MobiDBLite consensus disorder prediction 93 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0845 Lan-Chr17 10491915 10502422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0845 872 1170 MAP Kinase Gene Family AT5G19010 30.721 1.27e-29 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lan17g0845 Pkinase 2.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0845 - - lang:109331412 2305.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0845 17 10491915 10502422 Lan10g0656 10 6252920 6263716 PCT
Lan10g0656 10 6252920 6263716 Lan17g0845 17 10491915 10502422 PCT