Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0835 ATGGCAAGATTGAAGGTGTTATCAGCTCTTGACACAGCAAGAACACAATACTACCACTTCAAGGCCATAATCATTGCAGGCATGGGACTCTTCACTGATGCATATGATCTCTTCTCCATCACTCTCATCATCAAGATCATCGGAAGAATATACTACGGTGACCGCCACGGCGATAACAAGTATCAGACACCGCCCGTGGTGGCGTCGGCCTTGGTGGCCATCGCGCTGTTAGGCACGGCCATTGGTCAGCTGGTGTTTGGAAGGCTTGGTGACCTCAAAGGGCGGCGCTATGTCTATGGTCTTGCCTTGATGCTTATGGTCATTGGTTCTTTGGCTTCTGGTTTCTCCATTTGTACCTCTAGAACATGTGTTCTCCTCTCTCTAGGCTTCTTCAGGTTCGTGGTAGGGCTAGGGATTGGAGGAGACTACCCTTTATCCTCAACTATAATGTCCGAGTTTGCAAACAAAAGGACAAGAGGGTCTTTCATAGCAGCTGTGTTTTCCATGCAAGGGTTTGGCATATTAGCTAGTGCCATAGTCACAACGGTGGTGTGTTCAATATTCCACCGTGCCTCTAACACCACACCTCAAAAACCAACGCCCCAAGGGGCTGACGTTGCATGGAGGCTGATACTTATGATAGGTGCAATTCCGGCAGCCATGACTTATTACTGGCGGATGATGATGCCCGAAACTGCTAGGTACACAGCATTAGTGGAACAGAATGTGATGCAAGCAACAAAGGACATGGAGAAAGTTCTTGATATCTCAATCAGCGAGCAAGCTGAAGAAAATCCATTGCCACCAACCCAACATAAGTACCCTCTCCTTTCCATGGAGTTTCTTCGTCTACATGGCCGTGATCTTTTTGCATGTTCCTCTACATGGTTCCTTGTAGACATTGTGTTCTACAGCAGCAACCTTTTCCAGTATCAAATCTACAAACACTTCCTCAAAAACAAAAACAATGTTGATGTGTATCAAGAAGCTATCCACCTTGCTAGAATCCAAGCAATTATTGCAATATGTTCCACCATTCCTGGCTACTTCTTCTCAGTGTATTTCATTGATCGTGTGGGAAGAATCAAAATACAAATGATGGGGTTTTTCTTCATGGGTTTGGCTTTTTTTGCTATAGGAATTCCTTATTACTCATATTGGACAACTGAGAAAGAACATAATAAAGGTTTCATAGTTCTTTATGGCCTTGCTTTCTTCTTTGCCAATTTTGGACCAAACACCACTACTTTTATAGTCCCAGCTGAACTTTTCCCAGCTAGGTTTAGATCAACATGTCATGGCATTTCTGGTGCAGTTGGGAAAGTTGGTGCAATAATTGGATCTGTTGGGTTTTTATGGGCATCACATAAAGAAGAAGAGGAAGGGTACCCTAAGGGAATTGGAATGCAAGTTTCCCTTATCATACTTGGAGGGGTGTGCATTGTGGGGATGCTGGTCACATTTTTCTTCACTAGGGAAACTATGGGAAGGTCTTTGGAAGAGAATGAGATTGAACCTCTTCAAATTGAAGTTGAAGAGTTCAACTATGGTTGA 1554 0.4395 MARLKVLSALDTARTQYYHFKAIIIAGMGLFTDAYDLFSITLIIKIIGRIYYGDRHGDNKYQTPPVVASALVAIALLGTAIGQLVFGRLGDLKGRRYVYGLALMLMVIGSLASGFSICTSRTCVLLSLGFFRFVVGLGIGGDYPLSSTIMSEFANKRTRGSFIAAVFSMQGFGILASAIVTTVVCSIFHRASNTTPQKPTPQGADVAWRLILMIGAIPAAMTYYWRMMMPETARYTALVEQNVMQATKDMEKVLDISISEQAEENPLPPTQHKYPLLSMEFLRLHGRDLFACSSTWFLVDIVFYSSNLFQYQIYKHFLKNKNNVDVYQEAIHLARIQAIIAICSTIPGYFFSVYFIDRVGRIKIQMMGFFFMGLAFFAIGIPYYSYWTTEKEHNKGFIVLYGLAFFFANFGPNTTTFIVPAELFPARFRSTCHGISGAVGKVGAIIGSVGFLWASHKEEEEGYPKGIGMQVSLIILGGVCIVGMLVTFFFTRETMGRSLEENEIEPLQIEVEEFNYG* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0835 517 SUPERFAMILY MFS general substrate transporter 10 503 IPR036259 -
Lan17g0835 517 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-9-RELATED 2 504 - -
Lan17g0835 517 Pfam Sugar (and other) transporter 24 502 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lan17g0835 517 Gene3D MFS general substrate transporter like domains 18 515 IPR036259 -
Lan17g0835 517 ProSiteProfiles Major facilitator superfamily (MFS) profile. 22 495 IPR020846 GO:0022857
Lan17g0835 517 ProSitePatterns Sugar transport proteins signature 2. 134 159 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lan17g0835 517 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 2 504 - -
Lan17g0835 517 CDD MFS_PhT 23 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0835 Lan-Chr17 10327080 10330826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0835 1 505 Inorganic Solute Cotransporters AT1G76430 62.235 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0835 K08176 - gmx:100803834 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0835 17 10327080 10330826 Lan6g0855 6 7961453 7964000 LSH