Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0833 ATGGAATGCATTAATAAGAACGTGGAGCAGATTGTGGACGTTGGATCGGTGGTTGAAGCGGTTTCCACGGATGTTGGTGACGCACCTCTCTACACTGTTGAAAGCCTCTGCATGCGTTGTGGTGAAAATGGTATCACCAGATTTTTGTTCACTTCCATTCCTAATTTCAGAAAGATTTTGTTGTCGGCTTTTGAATGTATTCACTGTAGTGAGAGGAACAATGAAGTGCAGTTTGCAGGCGAAATTCAACCGCGAGGTTGCAATTACTCTCTGAAAGTCCCATCAGGCGATCCAAAGATGCTCAATAGGCAAGTGGTAAAATCAGAATCTGCTACCATTAAGATACCAGAATTGGATTTTGAGATTCCACCAGAGGCTCAGCGTGGTAGTCTGTCAACGGTGGAAGGGATACTAATGAGAGCTGCCGATGAACTTCAAGCGCTTCAAGAGGAACGCAAAAAAGTGTCTCCAGAGACAGCTGAAGCAATTGATCAGTTCTTGGTGAAATTGCGAGCCTGTGCAACTGGAGAGTCACCATTTACATTCTTTCTTGACGATCCTGCTGGAAACAGCTTCATTGAAAACCCGTTTACACCATCATCTGATCCATCACTGACTATCAAGTTTTATGAGCGAACTCCTGAGCAACAAGCGTTATTGGGATATCTCGTTGATTCTACACAGATTGCTCATGATGGAGCACTAGCAGGGGGTGAAGCTGGGGTATCTGGTCAAGTGAGGAGAGAACCACACGGGTCAATAGGGGCAGCAGCCGGTCATCGGGCAATTGCACAGAGTAATAGTGCAGAAATTGCAGATGCCTTGTTTTGGTATACTGCACCAGAAGAGGTGATGACTTTCCCATCAACTTGTGGTGCTTGTGCCACTAAGTGCGAGACTCGGATGTTTGTTACCAATATTCCATACTTCCAAGAAGTAATCGTTATGGCATCCACATGTGATGCTTGTGGTTACCGCAACTCTGAGTTGAAACCCGGTGGACGAATTCCTGAAAAAGGAAAAAGGATCACTCTTCAGGTGAAGAATGTTAATGACCTAAGCCGTGATGTAATAAAGTCTGATACTGCTAGTGTAGAAGTTCCTGAACTTGACTTGGAGCTGACAAGTGGCACTCTTGGAGGAGTTGTTACAACTGTTGAAGGTTTAATTACAAAAATTAGTGAAAGCCTCGAGAGGGTCCATGGATTTACTTTTGGAGACAGTCTGGAAGAAAATAGAAAAATCAAATGGCTTGACTTTAGAGCGAGGCTAACCAAGCTTCTTAGCTTGGAAGAACCTTGGACTTTAATTCTTGATGATGCACTGGCCAATTCTTTTGTAGCACCTGCAACTGATGATTTAAAAGATGACAAACAATTAATGTTTGAAGAATATGAGAGGTCATGGGAGCAAAATGAAGAATTAGGTCTGAACGACATTGACACTTCTTCTGCAGATGCTGCTTATGAATCAGCAAATACTACTAAAATTGAATGA 1497 0.4315 MECINKNVEQIVDVGSVVEAVSTDVGDAPLYTVESLCMRCGENGITRFLFTSIPNFRKILLSAFECIHCSERNNEVQFAGEIQPRGCNYSLKVPSGDPKMLNRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILMRAADELQALQEERKKVSPETAEAIDQFLVKLRACATGESPFTFFLDDPAGNSFIENPFTPSSDPSLTIKFYERTPEQQALLGYLVDSTQIAHDGALAGGEAGVSGQVRREPHGSIGAAAGHRAIAQSNSAEIADALFWYTAPEEVMTFPSTCGACATKCETRMFVTNIPYFQEVIVMASTCDACGYRNSELKPGGRIPEKGKRITLQVKNVNDLSRDVIKSDTASVEVPELDLELTSGTLGGVVTTVEGLITKISESLERVHGFTFGDSLEENRKIKWLDFRARLTKLLSLEEPWTLILDDALANSFVAPATDDLKDDKQLMFEEYERSWEQNEELGLNDIDTSSADAAYESANTTKIE* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0833 498 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 6 491 - -
Lan17g0833 498 Pfam ZPR1 zinc-finger domain 289 447 IPR004457 GO:0008270
Lan17g0833 498 Pfam ZPR1 zinc-finger domain 35 194 IPR004457 GO:0008270
Lan17g0833 498 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 290 481 IPR004457 GO:0008270
Lan17g0833 498 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 37 217 IPR004457 GO:0008270
Lan17g0833 498 SMART zpr1 289 449 IPR004457 GO:0008270
Lan17g0833 498 SMART zpr1 35 195 IPR004457 GO:0008270
Lan17g0833 498 PANTHER ZINC FINGER PROTEIN ZPR1 6 491 IPR040141 -
Lan17g0833 498 Gene3D ZPR1, zinc finger domain 27 80 IPR042452 -
Lan17g0833 498 Gene3D ZPR1, zinc finger domain 279 334 IPR042452 -
Lan17g0833 498 Gene3D ZPR1, A/B domain 335 477 IPR042451 -
Lan17g0833 498 Gene3D ZPR1, A/B domain 81 222 IPR042451 -
Lan17g0833 498 Coils Coil 131 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0833 Lan-Chr17 10276334 10284212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0833 5 497 C2H2 Transcription Factor Family AT5G22480 76.113 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0833 K06874 - gmx:100798741 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0833 17 10276334 10284212 Lan18g0443 18 8537761 8547518 LSH