LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan17g0822	ATGGACGAGGACCAAGAGATGGAGAGGTTTGGAATGGACAATGATTTTGAAGGTGGAGAATGGATTGGTGGTGAGTATTACTATCGAAAGCGCAAAGAAAAACATACTCAAACCAGAGAAGACGTTCTTTATGGAGTTTTTGCAGACTCGGAGGATGATGATGACGATTACTCTAGCAGAAAACGCAGAAAAGACCGTGGTCTATCTAAGAAGCAAGACCTCACCAAGCCTGTGAATTTTGTCTCTACTGGCACTTTCATGCCTAATCAAGATCCTGATAAGAATTCTAAAGAACAGGATGAAAAGGATAACTATATTAGTGAAGATAGGCCGGGTTTAGGTCTTGGTATGGGGTCTGGTAGCACTTCTGGATCTGGTTTAGGTTTTAATTCCAGTTATACTGCTAATGGCTCTGATAAGAATAATGAGTTTAATGAGAATGATGATGATAACTTTCTGCCTACGGTGCCTACTGCATTTGGAAAGAAGATTAAGGAGGGGGCAATGAGAAGGGAAAAGGAAAGGGAGAGAGAAAAATTGCAGAAGAAGAGGGGTCAACATCAAAATCAAGGTCAAGATGTTGATGTTGGGAAATTTGAAAAGCATACGAAGGGTATAGGGATGAAGCTATTGGAGAAGATGGGTTATAAAGGTGGTGGTCTTGGGAAGAATGAGCAAGGTATTGTGGCTCCTATTGAGGCGAGATTGAGGGCCAAGAATACCGGTATTGGATTTAATGACTCTAAGGAGACTATGCCATTGCCTGCTTTGCAGGTAGAGAAGAATATACCATCGGGAACCACCCAATCTATTGCTGGCCCAACTAAAAAAAGGTCATGGTCAAAGCAAGCAAGTTCAAAGAAGAAAGAGCATGAAAGCTATATTACTGCACAGGAGTTGTTAGCAAGCAAGCAAGAACAGGATTTGGAGGTTGTTCAGAAGGTTTATGATATGAGGGGACCACAGGTTCGAGTAATTACAAATATGTCTGATTTGAATGCTGAGGAGAAAGCAAAGGAAAATGATATCCCAATGCCAGAACTTCAGCATAATGTGGGGTTAATAGTTCGGTTGGCTGAGGCTGACATCCAAGAGATTGATAGAAAATTGAGGAGGGAGAGGGAGACAGCGCTTAGCTTGAAACAAGACAAAGAGAAGTTAGAAACTGAGGCAGCATTTAAAAAGAAGCAAGTGGATAGTATGGAGGAAATAGAGGGTGTGTTGGACCGAGTGGAAAAAGAGAACAGTCTAGGAACATTAACATTGGATTCCCTTGCTCAAAGCTTCAATGAGTTGTATAAAAGATATGCTGATAACTACAAGTTATGTAACTTGTCATGGATTGCTGGTTCGTATGCTTTGCCTTTTTTTATCAGAGTTTTTCAACAATGGGATCCTCTTCGAAATCCATATCACGGGATGGAGTTGGTATCGTCGTGGAAGACATTGCTACAAGAAGATTGCCTTGATATATGGGATGTATCATCGCCTTACACCCAATTGGTTTCTGAGGTTGTACTGCCAGCTGTTAGAATATCTGGTATCAATACCTGGCAGCCACGGGATCCTGAGCCAATGTTGCGGTTTCTAGAGTCATGGGAAAAGTTGCTTCCTTCTTCTGTCAGCACTACCATTTTGGACGAAATAGTCATGCCAAAATTGTCAAGTGCTGTAGATGCTTGGGAACCCCACCGTGAAACCATTCCCATTCATACATGGGTGCACCCATGGCTACCTCTACTAGGACACAAGCTGGAGGGTGTGTACCAGGGGATTCGTTTTAAATTGAGTACTGTTCTTGGTGCCTGGCACCCGAGTGATGGTTCTGCCTATGCTATATTGTCTCCTTGGAAGACTGTATTTGATTCCGCAAGCTGGGAACAGCTCATGCTTCGTTTTATTGTGCCGAAGTTGCAGCTTGTTTTGCAAGAGTTCCAAGTGAACCCAGCAAGTCAGAATCTTGATCAATTTTATTGGGTAATGAACTGGGCTTCTGCTATTCCAATTCACCTGATGGTTGATATGATGGATAAGTTTTTCTTCGCCAAGTGGCTTCAGGTTTTGTATCATTGGTTGTGCTCAAGTCCTAATTTTGAGGAAGTTACAAAATGGTATTTGGGCTGGAAAGAACTTATTCCAAAAGAGCTTTTGGCAAATGAAAGTATCCGGTATCAGCTTAACCGTGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGCAGGTGGTTCAACCTGGTTTAAAAGAGAATATCAGCTATCTCAGGGTACTAGAGCAAAGGCAATTTGAAGCACAGCAGAAAGCAGCAGCCTATGCTCAACACCAAGTTGCTGCAAGCTTGGGCAGTGCTGATGGTATGCAATCACATGAGTTGACCTTGAAAGAAGTTATTGAGGCCCATGCCCAGCAACATGGCTTGCTATTCAAGCTTAAACCTGGAAGAATGCACAATGGTCACCAAATATATGGGTTTGGTAATATCAGCATCGTAATAGACTCTCTAAATCAAAAGGTATATGCCCAAAATGAGGACACATGGTCTTTGGAATCTCTTGAAGGCTTGCTAGAGTTGCACAATAAATCTCTTAGTAAAAGACGCTGA	2601	0.4225	MDEDQEMERFGMDNDFEGGEWIGGEYYYRKRKEKHTQTREDVLYGVFADSEDDDDDYSSRKRRKDRGLSKKQDLTKPVNFVSTGTFMPNQDPDKNSKEQDEKDNYISEDRPGLGLGMGSGSTSGSGLGFNSSYTANGSDKNNEFNENDDDNFLPTVPTAFGKKIKEGAMRREKEREREKLQKKRGQHQNQGQDVDVGKFEKHTKGIGMKLLEKMGYKGGGLGKNEQGIVAPIEARLRAKNTGIGFNDSKETMPLPALQVEKNIPSGTTQSIAGPTKKRSWSKQASSKKKEHESYITAQELLASKQEQDLEVVQKVYDMRGPQVRVITNMSDLNAEEKAKENDIPMPELQHNVGLIVRLAEADIQEIDRKLRRERETALSLKQDKEKLETEAAFKKKQVDSMEEIEGVLDRVEKENSLGTLTLDSLAQSFNELYKRYADNYKLCNLSWIAGSYALPFFIRVFQQWDPLRNPYHGMELVSSWKTLLQEDCLDIWDVSSPYTQLVSEVVLPAVRISGINTWQPRDPEPMLRFLESWEKLLPSSVSTTILDEIVMPKLSSAVDAWEPHRETIPIHTWVHPWLPLLGHKLEGVYQGIRFKLSTVLGAWHPSDGSAYAILSPWKTVFDSASWEQLMLRFIVPKLQLVLQEFQVNPASQNLDQFYWVMNWASAIPIHLMVDMMDKFFFAKWLQVLYHWLCSSPNFEEVTKWYLGWKELIPKELLANESIRYQLNRGLDMMNQAVEGMQVVQPGLKENISYLRVLEQRQFEAQQKAAAYAQHQVAASLGSADGMQSHELTLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNISIVIDSLNQKVYAQNEDTWSLESLEGLLELHNKSLSKRR*	867

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan17g0822	866	MobiDBLite	consensus disorder prediction	164	192	-	-
	Lan17g0822	866	MobiDBLite	consensus disorder prediction	265	291	-	-
	Lan17g0822	866	Coils	Coil	356	414	-	-
	Lan17g0822	866	MobiDBLite	consensus disorder prediction	1	20	-	-
	Lan17g0822	866	Pfam	Tuftelin interacting protein N terminal	4	103	IPR022159	-
	Lan17g0822	866	Coils	Coil	170	190	-	-
	Lan17g0822	866	Pfam	G-patch domain	203	244	IPR000467	GO:0003676
	Lan17g0822	866	Pfam	GC-rich sequence DNA-binding factor-like protein	422	688	IPR022783	-
	Lan17g0822	866	MobiDBLite	consensus disorder prediction	54	72	-	-
	Lan17g0822	866	ProSiteProfiles	G-patch domain profile.	203	248	IPR000467	GO:0003676
	Lan17g0822	866	SMART	G-patch_5	201	246	IPR000467	GO:0003676
	Lan17g0822	866	MobiDBLite	consensus disorder prediction	93	108	-	-
	Lan17g0822	866	MobiDBLite	consensus disorder prediction	118	141	-	-
	Lan17g0822	866	PANTHER	TUFTELIN-INTERACTING PROTEIN 11-RELATED	7	852	IPR045211	GO:0000390
	Lan17g0822	866	MobiDBLite	consensus disorder prediction	32	192	-	-
	Lan17g0822	866	MobiDBLite	consensus disorder prediction	265	280	-	-
	Lan17g0822	866	PIRSF	TFIP11	1	861	IPR024933	-
	Lan17g0822	866	PANTHER	TUFTELIN-INTERACTING PROTEIN 11	7	852	-	-
	Lan17g0822	866	MobiDBLite	consensus disorder prediction	75	92	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan17g0822	Lan-Chr17	9887947	9891951	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan17g0822	206	244	C2H2 Transcription Factor Family	AT5G26610	53.846	2.71e-07	51.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan17g0822	K13103		-	gmx:100781621	1379.39