Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0821 ATGAAAGAGAGTGGTAAGAAAGAGGGTGCAGCTTCATCATCATCATCACCACCTTGTGCTGCATGCAGGCTTCTGAGGAGAAAGTGTACTCATGATTGTGTTTTTGCTCCTTATTTCCCACCTACTCAGCCTCATGAGTTTGCAAATGTGCACAAGGTTTTTGGTGCCAGTAATGTCAACAAAATGCTCCAGGAAATACCAGAGCATCATAGAGGAGATGCTGTGAGTAGCATGGTGTATGAAGCAAACGCAAGAGTGAGAGATCCTGTGTATGGCTGTGTTGGGGCTATCTCTTCTCTTCAGCAACAGATTAATATCCTACAGACCCAATTGGTTATCACCCAGGCTGAGGCCATGCACCTTAGGGTACACCACACTGCATCATCCAACATCATAGAATCACAAGCCAAGTATTTTTGTGACATGGACATGGTGGAACATACTAGCTATGGTGATTCAATGCGGTCATGCTAA 474 0.4473 MKESGKKEGAASSSSSPPCAACRLLRRKCTHDCVFAPYFPPTQPHEFANVHKVFGASNVNKMLQEIPEHHRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQINILQTQLVITQAEAMHLRVHHTASSNIIESQAKYFCDMDMVEHTSYGDSMRSC* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0821 157 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 14 135 - -
Lan17g0821 157 Pfam Lateral organ boundaries (LOB) domain 18 115 IPR004883 -
Lan17g0821 157 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 14 135 - -
Lan17g0821 157 Coils Coil 97 117 - -
Lan17g0821 157 ProSiteProfiles LOB domain profile. 17 118 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0821 Lan-Chr17 9881094 9885885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0821 1 157 AS2 family AT1G31320 58.659 1.91e-63 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan17g0821 LOB 4.7e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0821 - - pop:7477807 205.297