Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0819 ATGGCTTCTCGCAGGTCAAGTGCAAGAGTGAACTTCAGGGCAAGTGACTCTGGTGCTGCAGTAGAAAAGCCGACCCCACCCCCGCTGCTGCCTGATTCTACAACAAATTCCCAAGGGGGTGAGATTCAACCACTTTCATCAGAACTATACTTTGATGTGGTTCTTTCAAAAACACATCTTAGTGACGGTTATCGAATGGGGCTGCCGAACAACATAAGCTCAAAACTTCCTCTTTTTGAGGTCCCTGCGGTTCTCAACTGTCGAGGTAAGAGGTGGGACATAATGTATAAGGGACAAAACAAAATTCGCAAGTGGTTTGATTGTGGCGGCTGGAAGATTTTTGCGGATGATAATTGTTTGAATATCGGAGATGCATGTGTTTTTGAACTCATGGAATACAGTAACCAGAAAATCATTTTTAAAGTTCAAATTCTTAGAGGTAACATTACATCAAAATATCATAATGGTATACGGCCAGATGAGCCGATTGTCATAGACTAG 501 0.4251 MASRRSSARVNFRASDSGAAVEKPTPPPLLPDSTTNSQGGEIQPLSSELYFDVVLSKTHLSDGYRMGLPNNISSKLPLFEVPAVLNCRGKRWDIMYKGQNKIRKWFDCGGWKIFADDNCLNIGDACVFELMEYSNQKIIFKVQILRGNITSKYHNGIRPDEPIVID* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0819 166 MobiDBLite consensus disorder prediction 1 40 - -
Lan17g0819 166 Pfam B3 DNA binding domain 55 141 IPR003340 GO:0003677
Lan17g0819 166 CDD B3_DNA 50 146 IPR003340 GO:0003677
Lan17g0819 166 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 36 153 IPR044837 -
Lan17g0819 166 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS04G0386900 36 153 - -
Lan17g0819 166 SUPERFAMILY DNA-binding pseudobarrel domain 48 145 IPR015300 -
Lan17g0819 166 SMART B3_2 51 148 IPR003340 GO:0003677
Lan17g0819 166 Gene3D - 38 148 IPR015300 -
Lan17g0819 166 ProSiteProfiles B3 DNA-binding domain profile. 51 148 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0819 Lan-Chr17 9849720 9853065 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lan17g0819 B3 2.3e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0819 - - lang:109331725 336.65