Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0792 ATGTTAATTACTGAGTATCTAAGAGGGGGTGACCTTCATCAGTACCTCAAGGAAAAAGGTTCACTCAATGCTGCAACCGCTATCAACTTTTCCATGGATATTGCCAGAGGAATGGCCTATCTTCATAATGAACCAAATGTTATAATTCATAGAGACCTGAAGCCAAGGAATGTTCTTTTAGTTAATTCTAGTGCTGACCATTTAAAAGTTGGAGATTTTGGATTGAGTAAACTTATCAAGGTCCAAAGTTCTCATGATGTATACAGGATGACTGGTGAAACTGGAAGCTACCGCTACATGGCTCCTGAAGTTTTCAAACACCGGAGATATGATAAGAAGGTTGACGTGTTCTCTTTTGCAATGATTTTGTATGAGATGCTTGAAGGTGAACCACCTTTTGCAAACTTGGAACCTTATGAGGGAGCCAAACGGGCAGCAGAAGGACACAGACCTACTATTCGCGAAAAGGGATATACCCCCGAGCTCATAGAGTTAACAGAGCAATGTTGGGCTGCTGACATGAATCAAAGACCTTCCTTCATAGATATCCTTAAACGGCTTGAAAAGATCAAGGGAAACTTACCATCAGATCATCATTGGCACTTGTTCTCTTCGTAA 618 0.4094 MLITEYLRGGDLHQYLKEKGSLNAATAINFSMDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKLIKVQSSHDVYRMTGETGSYRYMAPEVFKHRRYDKKVDVFSFAMILYEMLEGEPPFANLEPYEGAKRAAEGHRPTIREKGYTPELIELTEQCWAADMNQRPSFIDILKRLEKIKGNLPSDHHWHLFSS* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0792 205 SMART serkin_6 2 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0792 205 ProSiteProfiles Protein kinase domain profile. 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0792 205 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 197 - -
Lan17g0792 205 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 1 197 - -
Lan17g0792 205 Pfam Protein tyrosine and serine/threonine kinase 1 187 IPR001245 GO:0004672|GO:0006468
Lan17g0792 205 Gene3D Transferase(Phosphotransferase) domain 1 1 194 - -
Lan17g0792 205 PRINTS Tyrosine kinase catalytic domain signature 4 17 IPR001245 GO:0004672|GO:0006468
Lan17g0792 205 PRINTS Tyrosine kinase catalytic domain signature 42 60 IPR001245 GO:0004672|GO:0006468
Lan17g0792 205 PRINTS Tyrosine kinase catalytic domain signature 158 180 IPR001245 GO:0004672|GO:0006468
Lan17g0792 205 ProSitePatterns Serine/Threonine protein kinases active-site signature. 48 60 IPR008271 GO:0004672|GO:0006468
Lan17g0792 205 SUPERFAMILY Protein kinase-like (PK-like) 1 200 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0792 Lan-Chr17 9493735 9496331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0792 1 205 MAP Kinase Kinase Kinase AT1G14000 85.366 1.15e-130 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lan17g0792 PK_Tyr_Ser-Thr 6.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0792 - - lang:109330548 421.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0792 17 9493735 9496331 Lan6g0894 6 8345410 8354721 LSH