Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0782 ATGCCATCTCTATGCATCTTCACACCATTCCCATCACTTCAAAACCCTAACTTTCACCATACCCATTTCGTCAATTCCCCTTTAACTTCTCACCTTCACTTCTCCCACACCAGAATCCACTTCCAGGGAAAAATTCATTGCAACGCTTTGAAGGACTCCAGTGAAGAAATCAAAGCTGTTTTGGGTTCTGACGGTGGTGGTGGAGGTGGAGGTGGTGGTGGTGACGGTGGTAATGATGGTGATGGTGATCGGAGTAAGAAGGTGGAGAAGAAAGATGGGCCTTTGCCAGATTGGTTGAATTTTACTTCTGATGATGCGAAAACGGTTTTTGCGGCTTTGGCGATTTCGCTTGCGTTTCGAACGTTTGTGGCGGAGCCTAGATATATTCCTTCGTTGTCAATGTATCCTACATTTGATGTTGGAGATCGACTTGTTGCAGAAAAGGTTTCATACTACTTTAGAAAGCCATGTGCAAATGACATAGTGATATTTAAAAGCCCTCCAGTCCTTCAGGAAGTTGGATATACAAATGATGATGTTTTTATAAAACGCGTGGTTGCGAAGGAAGGTGATGTTGTGGAGGTTCGCAAAGGGCATCTTATTGTTAATGGGGTTGAGAAGAATGAAAAGTTCATCTTTGAGGCACCTTCCTATGAGATGGAACCTACACGTGTACCAGAGAACTATGTTTTTGTGATGGGAGACAACCGCAATAACAGCTATGATTCTCACGTGTGGGGTCCCCTTCCAGCCAAGAACATTATAGGTAGGTCGGTATTCCGCTATTGGCCGCCAAATAGAATTGCTAGCACAATTTCTAAGGAAGGGTGTGCTGTTGAAAACAAGCAGGAGAGTACTCTAGCATCTCAATGA 873 0.4399 MPSLCIFTPFPSLQNPNFHHTHFVNSPLTSHLHFSHTRIHFQGKIHCNALKDSSEEIKAVLGSDGGGGGGGGGGDGGNDGDGDRSKKVEKKDGPLPDWLNFTSDDAKTVFAALAISLAFRTFVAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTNDDVFIKRVVAKEGDVVEVRKGHLIVNGVEKNEKFIFEAPSYEMEPTRVPENYVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPNRIASTISKEGCAVENKQESTLASQ* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0782 290 ProSitePatterns Signal peptidases I signature 3. 230 243 IPR019758 GO:0004252|GO:0016021
Lan17g0782 290 MobiDBLite consensus disorder prediction 60 91 - -
Lan17g0782 290 ProSitePatterns Signal peptidases I serine active site. 131 138 IPR019756 GO:0004252|GO:0016021
Lan17g0782 290 Pfam Signal peptidase, peptidase S26 106 263 IPR019533 GO:0004252|GO:0006465
Lan17g0782 290 PANTHER SIGNAL PEPTIDASE I 85 274 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lan17g0782 290 PANTHER THYLAKOIDAL PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATED 85 274 - -
Lan17g0782 290 SUPERFAMILY LexA/Signal peptidase 120 270 IPR036286 -
Lan17g0782 290 CDD S26_SPase_I 125 257 IPR019533 GO:0004252|GO:0006465
Lan17g0782 290 TIGRFAM sigpep_I_bact: signal peptidase I 107 265 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lan17g0782 290 Gene3D Umud Fragment, subunit A 119 277 - -
Lan17g0782 290 PRINTS Bacterial leader peptidase 1 (S26A) family signature 122 138 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lan17g0782 290 PRINTS Bacterial leader peptidase 1 (S26A) family signature 181 193 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lan17g0782 290 PRINTS Bacterial leader peptidase 1 (S26A) family signature 225 244 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0782 Lan-Chr17 9282228 9286229 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0782 134 264 MADS-box Gene Family AT1G29960 33.083 1.71e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0782 K03100 - gmx:100815810 410.609