Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0753 ATGGAAATTCAATTCCAGGATCCAAACCTGCAGCATCAGAAAGCTGGCATTTCAGTCACTAACAAAAAAAGAGGCAAATTCAAAGGTAGAAGCAGAAACGGCAACACAAACAAATTTGTTGGGGTTAGACAAAGGCCTTCAGGTAGATGGGTAGCTGAGATCAAAGACACAACTCAGAAAATAAGAATGTGGCTTGGCACATTTGAGACTGCTGAGGAAGCAGCAAGAGCTTATGACGAAGCCGCGTGCCTTCTTCGCGGATCAAACACTCGCACCAACTTCATAACTCATGTCTCCATGGATTCTCCTATCGCTCTTCGCATTCGAAATCTGCTTAAAGACAGAAAAGGCGTCAAACAACAACCCGAAGATATGGTTGATGCATCATCTACCACAAGAGTTAGCAATGCTAGCACTAGTACTCATTCAAGCAATAATAATACTAATGACAAGAATGATGACTCTCTTTCTAGTGTAACAACAACTCAAAACAGCACACAGTTGTTTGATGATGCTTATAAACCTGATTTGAACAATTGCAAGGTGGAATCAGAGTCAATTCCACAATCCAATCCCAATTTTTCGTGGGGTTTCGACAATTTTCCTTATGCTCAAATGTTGGATTTAGCAAAGATTGATGGCTTTAGTGATACACCAGATTATGAGCTATCAGAATTTGAGAGAATGAGAGTTGAAAGACAAATATCAGCTTCACTCTATGCAATTAATGGAGTGCATGAGTACATGGAAGCTGTTAAGGACTCAAATGAATCTCTGTGGGATCTTCCACCTTTATGCTCATTGTTCTGTTAA 813 0.401 MEIQFQDPNLQHQKAGISVTNKKRGKFKGRSRNGNTNKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETAEEAARAYDEAACLLRGSNTRTNFITHVSMDSPIALRIRNLLKDRKGVKQQPEDMVDASSTTRVSNASTSTHSSNNNTNDKNDDSLSSVTTTQNSTQLFDDAYKPDLNNCKVESESIPQSNPNFSWGFDNFPYAQMLDLAKIDGFSDTPDYELSEFERMRVERQISASLYAINGVHEYMEAVKDSNESLWDLPPLCSLFC* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0753 270 MobiDBLite consensus disorder prediction 124 162 - -
Lan17g0753 270 MobiDBLite consensus disorder prediction 116 162 - -
Lan17g0753 270 ProSiteProfiles AP2/ERF domain profile. 38 95 IPR001471 GO:0003700|GO:0006355
Lan17g0753 270 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 15 257 - -
Lan17g0753 270 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Lan17g0753 270 PRINTS Ethylene responsive element binding protein signature 61 77 IPR001471 GO:0003700|GO:0006355
Lan17g0753 270 SUPERFAMILY DNA-binding domain 38 95 IPR016177 GO:0003677
Lan17g0753 270 Pfam AP2 domain 38 87 IPR001471 GO:0003700|GO:0006355
Lan17g0753 270 SMART rav1_2 38 101 IPR001471 GO:0003700|GO:0006355
Lan17g0753 270 CDD AP2 38 94 IPR001471 GO:0003700|GO:0006355
Lan17g0753 270 Gene3D AP2/ERF domain 37 96 IPR036955 GO:0003700|GO:0006355
Lan17g0753 270 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 15 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0753 Lan-Chr17 7434755 7435915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0753 10 270 AP2-EREBP Transcription Factor Family AT5G19790 43.066 3.71e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan17g0753 AP2 5.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0753 K09286 - gmx:100796898 358.607