Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0743 ATGGATCCTAATAATGCAACTAGCATGCATTCTCATTGTGTAGACATAACTATGGAAGTGCACCAAGTTGTCCCACCACCCTACAAGAGCACCCTACACAAGTTCAAGGCCAGGTTGAAGGAAACTTTTTTCCCTGATGATCCTTTGCGCCAATTCCAGGGACAATCACTTAATAGAAAGTTAATCCTTGGAGCTCAATACGTCTTCCCTATTCTTCAATGGGGGCCTAATTATACCCTCAAGCTCTTTAAATCTGACCTTGTTTCTGGCCTCACTATTGCTAGCTTGGCCATCCCACAGGGAATCAGTTATGCTAAGCTAGCAAATCTTCCCCCAATTGTTGGACTTTATTCTAGTTTTGTTCCCCCACTTGTTTATGCTGTTCTTGGAAGCTCAAGGGACCTAGCAGTAGGACCTGTTTCTATTGCTTCTCTTGTTATGGGATCCATGTTAAGGCAAGAAGTGTCTCCCACACTAGACCCTATTCTGTTTCTTCAGCTAGCTTTCACTTCAACATTCTTTGCTGGTCTCTTTCAAGCTTCTCTTGGAATTCTAAGGCTAGGATTTATAATTGATTTTCTATCTAAGGCCATTCTTATTGGGTTCATGGCTGGAGCTGCTATAATTGTATCTTTGCAACAACTCAAGAGCCTCCTTGGAATCACACATTTCACAAATCAGATGGGTTTGGTTCCTGTTATGAGTTCTGTTTTTCATAATATACATGAGTGGTCATGGCAAACAATAGTGATGGGGATTTGCTTCTTGGTGCTACTATTGCTGGCAAGACATGTTAGCATGAGGAAACCAAAACTATTCTGGGTTTCAGCTGGAGCACCACTTGTATCTGTAATCATCTCTACTCTCCTGGTTTTTGCAATCAAGGGTCAAAAGCATGGTATTAGTGTAATTGGAAAATTACAAGAAGGAATAAATCCTCCTTCATGGAATATGTTACGCTTTCATGGAACTTACCTAGGCCTAGTCATGAAAACAGGACTTATAACTGGCATTTTATCCCTTACTGAAGGAATTGCAGTAGGAAGGACATTTGCAGCTCTCAGAAACTACAAAGTTGATGGAAACAAGGAAATGATTGCAATCGGATTTATGAATGTCATTGGCTCCTCCACTTCCTGCTATGTTACAACAGGTGCTTTCTCTCGCTCTGCTGTTAATAACAATGCAGGTGCAAAAACAGCAGTGTCAAATATTGTGATGTCTGTGACAGTCATGGTGACACTCCTTTTCGTTATGCCATTGTTCCAATACACGCCTAATGTTGTTTTGGGTGCAATCATAGTCACAGCAGTAATTGGCCTCATTGATATCCCTGCTGCTCTTCAAATTTGGAGGATAGACAAATTCGATTTCATTGTGATGTTGGTTGCATTCTTTGGTGTTATCTTCATCTCTGTTCAGCTTGGTCTTGCTATAGCAGTTGGGTTGTCAACTTTTAAGATACTCCTGCAAATTACAAGGCCTAAAATAGTAATGCTGGGGAAGATACCAGGAACAGACATATATAGAAATCTTGATCAATATAAGGAAGCTGAAAGAATACCTGGTTTTCTTATTTTAAGCATTGAGGCTCCTATCAATTTTGCTAACATTACATATCTCAACGAGAGGACATTAAGATGGATTGAAGAAGAAGAAGATAACATAAAGGAACACTCAAATCTCCGATTTATTATCCTGGAGATGTCAGCTGTGAGCGCCATCGACACAAGTGGAATCTCACTTTTCAGGGAGTTAAAATCAACATTAGAAAAGAAGGGTGTTGAGCTTGTCTTGGTGAACCCCCTCGCCGAGGTCATAGAAAAGCTGAAAAAAGCAGATAAAGATAACGATTTCATACGAGCAGATAACCTTTTCTTGACAGTTGGAGAGGCCGTAGCTTCACTTTCATCAGCAATGAAAAGTCAATCATCAACCATGACCGAAGGGGCACAAACAATTGTGGCACATTACTGA 1977 0.4052 MDPNNATSMHSHCVDITMEVHQVVPPPYKSTLHKFKARLKETFFPDDPLRQFQGQSLNRKLILGAQYVFPILQWGPNYTLKLFKSDLVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLVMGSMLRQEVSPTLDPILFLQLAFTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTNQMGLVPVMSSVFHNIHEWSWQTIVMGICFLVLLLLARHVSMRKPKLFWVSAGAPLVSVIISTLLVFAIKGQKHGISVIGKLQEGINPPSWNMLRFHGTYLGLVMKTGLITGILSLTEGIAVGRTFAALRNYKVDGNKEMIAIGFMNVIGSSTSCYVTTGAFSRSAVNNNAGAKTAVSNIVMSVTVMVTLLFVMPLFQYTPNVVLGAIIVTAVIGLIDIPAALQIWRIDKFDFIVMLVAFFGVIFISVQLGLAIAVGLSTFKILLQITRPKIVMLGKIPGTDIYRNLDQYKEAERIPGFLILSIEAPINFANITYLNERTLRWIEEEEDNIKEHSNLRFIILEMSAVSAIDTSGISLFRELKSTLEKKGVELVLVNPLAEVIEKLKKADKDNDFIRADNLFLTVGEAVASLSSAMKSQSSTMTEGAQTIVAHY* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0743 658 CDD STAS_SulP_like_sulfate_transporter 515 629 - -
Lan17g0743 658 SUPERFAMILY SpoIIaa-like 518 636 IPR036513 -
Lan17g0743 658 ProSitePatterns SLC26A transporters signature. 112 133 IPR018045 GO:0008271|GO:0008272
Lan17g0743 658 Gene3D STAS domain 494 638 IPR036513 -
Lan17g0743 658 Coils Coil 603 623 - -
Lan17g0743 658 Pfam Sulfate permease family 83 463 IPR011547 GO:0016021
Lan17g0743 658 TIGRFAM sulP: sulfate permease 70 632 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan17g0743 658 PANTHER BNAA09G30120D PROTEIN 19 638 IPR030313 -
Lan17g0743 658 ProSiteProfiles STAS domain profile. 514 636 IPR002645 -
Lan17g0743 658 Pfam STAS domain 515 632 IPR002645 -
Lan17g0743 658 PANTHER SULFATE TRANSPORTER 19 638 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0743 Lan-Chr17 7055316 7062183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0743 2 643 Inorganic Solute Cotransporters AT3G15990 66.770 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0743 K17471 - gmx:100787284 1153.66