Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0742 ATGGAAGTGTCTAGCAGCCATAATGGCAGTAACATGATGTGGTTTTTCAAGGATAGAGGATTTGATGACAATAGCATACAAGGAATGTTCAGAAAGTGCAAGCGCCTTGAGAATACACATCAGGAAAGAGCAAGTGAGAACTGGGAGTATTTCAAAGGGATTGGCATTCAAGAAAGGAAACTGCCCTCAATTGTTTCCAAATGTCCCAAGATTCTTGTGCTTGGTCTGAATGAGAAGATCGTGCCCATGGTTGAGTGTCTCAAGACGTTGGGGACAAAACCCAATGAAGTCACTTCTGCCATAACCAAGTTCCCTCACATACTCTCACACAGTGTGGAAGAAAAGCTTTGCCCCCTATTGGCGTTCTTTCAGGCATTGGGCATTCCTGAAAAGCAACTTGGGAAGATTATACTTCTCAACCCTCGGCTTATCAGCTACAGCATTGAAACTAAGCTGACAGAGATCGTGGACTTCCTTTCTAGCCTTGGACTCAACAAAGATGGAATGATCGGCAAGGTCATAGTCAAGGACCCATATATTATGGGTTACAGTGTAGATAAAAGGCTCCGCCCTACTTCACAGTTTCTGAAGTCAATAGGTCTGTCTGAGCCAGATCTTCAAGCAGTCACTTTGAACTTCCCAGAACTATTGAGTAGAGATGTGGACAAGGTTTTGCAACCCAATTATGCTTATTTGAAGAAATGTGGATTTCAAGATCAGCAGATAGTTTCTTTGGTTATTGGTTTTCCTCCTATCCTTATCAAAAGCATCAAGAATTCTTTGGAACCAAGGATCAAGTTTTTAGTAGAAGTAATGGGGAGACAAGTTGAGGAAGTCATCGATTATCCTTGCTTCTTTCGTCATGGCCTGAAGAGAAGATTAGTGTCGCGGCACAAACTCCTAAAGCAGAGGAATTTAAATTGTAGCTTGAGTGAAATGTTGGACTGTAATCAAAAGAAATTCCTCATCAAGTTCAGCTTGTTGTAA 987 0.4174 MEVSSSHNGSNMMWFFKDRGFDDNSIQGMFRKCKRLENTHQERASENWEYFKGIGIQERKLPSIVSKCPKILVLGLNEKIVPMVECLKTLGTKPNEVTSAITKFPHILSHSVEEKLCPLLAFFQALGIPEKQLGKIILLNPRLISYSIETKLTEIVDFLSSLGLNKDGMIGKVIVKDPYIMGYSVDKRLRPTSQFLKSIGLSEPDLQAVTLNFPELLSRDVDKVLQPNYAYLKKCGFQDQQIVSLVIGFPPILIKSIKNSLEPRIKFLVEVMGRQVEEVIDYPCFFRHGLKRRLVSRHKLLKQRNLNCSLSEMLDCNQKKFLIKFSLL* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0742 328 PANTHER CGI-12 PROTEIN-RELATED 11 327 IPR003690 GO:0003690|GO:0006355
Lan17g0742 328 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Lan17g0742 328 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Lan17g0742 328 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Lan17g0742 328 SMART mt_12 243 275 IPR003690 GO:0003690|GO:0006355
Lan17g0742 328 SMART mt_12 62 93 IPR003690 GO:0003690|GO:0006355
Lan17g0742 328 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Lan17g0742 328 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Lan17g0742 328 Pfam mTERF 97 322 IPR003690 GO:0003690|GO:0006355
Lan17g0742 328 Pfam mTERF 14 124 IPR003690 GO:0003690|GO:0006355
Lan17g0742 328 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 11 327 - -
Lan17g0742 328 Gene3D Transcription termination factor 3, mitochondrial 95 327 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0742 Lan-Chr17 7052350 7054610 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan17g0742 mTERF 2.4e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0742 K15032 - gmx:100816929 558.14