Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0734 ATGGTGATGAACAACAATCACTGGAGCATTAATGAACCAGTTCACAGGTTTAAGAATGATTGTTCTCATAAGGATCGATACAGAGAGATAATAAATTATAAGTTTTATCCTTATACTTTTCGGTGGATATTGCCTCCATCACATTGGATTAAACTGAATGCAGATGGAGGGTTTTTTGCGAGATCTTCTACCATGAGTAGCAATGGTATTGACGTGAGCACCATGTTTGGATTTCAGTTACTGTTCTTTCTACTCTCTCTCTCTCACCCTTTAATTACTCTCTCTCTCTCTCTTCAATTCTATATCTTCCATTTCTCTTTATTGTCCTTTACCTTCTTCTCTTCTCATCCCTTCATACTCTTGAATAATAATATAATAATTAAAAATAAAAAAAGAAGTAATTTCAAGAGTAAGAAGAATCATCTTCATCAGAAAACGCTTCTTCCGAATCAAACCTTCACTTCACCGACTCATTCGATCGGGTGGGATAGCTTGACTCTGATGCAAGGTCAAAGAAAGACTACCGGGTCCTTTCAATCAATTGCTAATTTGATGCAAGGGCCTAGTTCTAGTGGCACTGATATGAACAACCAACAGTCTTCCTTGAATCACATGCAAAACTCTGTAGATTTCCGGTTGTCGGATTATAGGGGTTCTTCTGGCGAGACTGCATGCTTATGTGCTACTGGTCCTAATGTTCCGCGGTTCAGTGGCTGGAATGCTGGTGAATCAAGTTCTAGACTGAATCTGGTCAACCAAGTCAATGATGGCGGTCTAAAATCAGAACATGTGATGTCTTCTTCGTGTAATGCTGCCACTGAGGATTTTCTCAGATCAGAGGAAAGGCAATTTGAACCAAATAACGTGATTTTTCCTGCTAGTTCAAATACTAGTCTGCTTGGGAACCAATCCAGAATCCGCTCTTCCTTTTTGCAAGGTTCCAGCTCTAATCATATAACCCAGAATGCTAGCCAAGACATGGAGAACAATGCTAACACTGCTGATCGTGGGAAGGCAAAAGAAGCCGGTAGTAGTGTTAATAACAGCTACCCTAGTGGATTAGAAAGAGAGCAGACATCATTTGGAAATGCTCCTTTTGATCATATGGGAACTTCATCTGAAAGCTCTGGATACATGGCTTGGGGAGATAGTGCCAGTTCAAGTTCTTCTTTAGTTAATTGGGGCTCTTCCTGCAAGAGGAAGTCCCTTGAAGGTAATTCTAGGCAACTGTGTATTGGCGGAAGCTCAAGCTCATTTGTACAATCTGAAGGTGGTTGTTGGTCTACTGATCCCGCTGATCTTAATTGTTCGAGTAGTTTATGTGTTTCTGCACCCTTACAGGACATTTCTGTTATTAGTCCTTCATTGCCGCAGAGCACAAGAAATGAAGTAAGACAAGAAGCTTCCCATCCATTTCCTTCAATAAGTTTTCCAGAAAATGTGGAAAGGCCTCTAAGAAACTTTGACAGGAGAATAACCCAAGTACAGCATCAGGAATCTGTACTTAATTTATCATCACCGGGGAGTGCTAGGCATCTTAGCCATTCTTCTCCACATCAATTACCTGGTTCTCACACATTTAATGATTCTTTGGAATTGAGGTTAACAGCTGGTGTAAATGCTGCCAATTCCGGGGCTCTTCAGAACCAGTCACCTGACGTGGACGTTCGTCCTTTTACTTTCAATAGAGCTTCTAGCTCTAGAGGGCCCAGATCTTCAATTTACAGTTCTGGAGAAAGAGCAGTCCGGGAAAATTTCAATTTGAGGGTCTTTGCAAGAGACAGTACCGAGCACCCAATGAATGTGTCTGCATCTTCAGGACATGAACCTACAGGGTGGCATACATCATCTAGTAATGTGCACAACTCTGAAGGTATACCTCCTCCATCCTGGATTGGATCTGGTTCAAATGTCCAATCGTTACCTAACCCGAGTTGGATTGTTAACCATGAAGCTCCAACAGAAAATCTGCAGAGATTGTCAGAGTTCAATCCTTGGTCCCTTTTCCCGTCACTTAACACAACATCTGGTGTTCATAATGGCCATTCTACTCCATCTCCTTCTGGCCCTCTTTCATTCACTCAGGGTTCTAGCAGCAATCAATCATATCCAAGAACAGCATTGTTGACTGAAAGAAGGGGCAGTGTTCTCCCTGCTCCTCATTCACTGCGAGGACTAACGGTTGATAATGAGGGGAGACACCGACTATTGTCTGAGATTCGCCAAGTCCTGGTTGCAATGAGGAGGGGTGAGAACTTACGAGCTGAGGATTACATGCTCTTTGACCCTTTCATATATCATGGAATGGCTGAAATGCATGACAGGCACAGAGGAATGCGCCTTGATGTTGATAACATGTCTTATGAGGAATTGCTAGCATTGGAGGAGCGTATAGGAGACGTGAACACTGGATTGAGTGAGGATGTCATTATAAATTTGATGAAACAGCGAATTTACATGTCTTTTATGACAGAGTCCTCTACAGATTTGGAACCTTGCTGTATCTGTCAGGAGGAATATGCCGATGGAGAGAATATCGGTTCACTAGATTGTGGGCATGAGTTCCACATTAATTGCATCAAGCAGTGGCTAATGCAGAAGAATCTGTGTCCCATTTGCAAAACAACAGCTTTAGCTACATGA 2643 0.4215 MVMNNNHWSINEPVHRFKNDCSHKDRYREIINYKFYPYTFRWILPPSHWIKLNADGGFFARSSTMSSNGIDVSTMFGFQLLFFLLSLSHPLITLSLSLQFYIFHFSLLSFTFFSSHPFILLNNNIIIKNKKRSNFKSKKNHLHQKTLLPNQTFTSPTHSIGWDSLTLMQGQRKTTGSFQSIANLMQGPSSSGTDMNNQQSSLNHMQNSVDFRLSDYRGSSGETACLCATGPNVPRFSGWNAGESSSRLNLVNQVNDGGLKSEHVMSSSCNAATEDFLRSEERQFEPNNVIFPASSNTSLLGNQSRIRSSFLQGSSSNHITQNASQDMENNANTADRGKAKEAGSSVNNSYPSGLEREQTSFGNAPFDHMGTSSESSGYMAWGDSASSSSSLVNWGSSCKRKSLEGNSRQLCIGGSSSSFVQSEGGCWSTDPADLNCSSSLCVSAPLQDISVISPSLPQSTRNEVRQEASHPFPSISFPENVERPLRNFDRRITQVQHQESVLNLSSPGSARHLSHSSPHQLPGSHTFNDSLELRLTAGVNAANSGALQNQSPDVDVRPFTFNRASSSRGPRSSIYSSGERAVRENFNLRVFARDSTEHPMNVSASSGHEPTGWHTSSSNVHNSEGIPPPSWIGSGSNVQSLPNPSWIVNHEAPTENLQRLSEFNPWSLFPSLNTTSGVHNGHSTPSPSGPLSFTQGSSSNQSYPRTALLTERRGSVLPAPHSLRGLTVDNEGRHRLLSEIRQVLVAMRRGENLRAEDYMLFDPFIYHGMAEMHDRHRGMRLDVDNMSYEELLALEERIGDVNTGLSEDVIINLMKQRIYMSFMTESSTDLEPCCICQEEYADGENIGSLDCGHEFHINCIKQWLMQKNLCPICKTTALAT* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0734 880 ProSiteProfiles Zinc finger RING-type profile. 833 874 IPR001841 -
Lan17g0734 880 MobiDBLite consensus disorder prediction 598 638 - -
Lan17g0734 880 MobiDBLite consensus disorder prediction 677 704 - -
Lan17g0734 880 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 796 878 IPR013083 -
Lan17g0734 880 MobiDBLite consensus disorder prediction 312 332 - -
Lan17g0734 880 SMART ring_2 833 873 IPR001841 -
Lan17g0734 880 MobiDBLite consensus disorder prediction 342 361 - -
Lan17g0734 880 CDD RING-H2_TTC3 832 874 - -
Lan17g0734 880 MobiDBLite consensus disorder prediction 312 361 - -
Lan17g0734 880 MobiDBLite consensus disorder prediction 597 638 - -
Lan17g0734 880 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 170 880 IPR045191 GO:0061630
Lan17g0734 880 SUPERFAMILY RING/U-box 814 877 - -
Lan17g0734 880 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 170 880 - -
Lan17g0734 880 Pfam Ring finger domain 833 874 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0734 Lan-Chr17 6819066 6833045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0734 183 880 C3H Transcription Factor Family AT2G15530 35.356 9.97e-106 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0734 - K19041 lang:109330827 1744.55