LGRPv2

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan17g0726	ATGTATCCTTTAACTCGTCTCACCTCCGAGCAAGAACTCTCAGTCATTGTTGCAGCCCTCACCAATGTTGTCACGGGATCCACATCTACCTCCCTGGACACCACCTCAAATAATGTCATCTCTCAATTCTCCTCACAGCTAACGTCACAAGCAACCTCTGCTACCACAGGAGGAACCACCTCCGATCAAAGAATACTTCCGACCTCGAACATAGTAACATGCAGCGAATGCAATATCGCCGGGTGCTTAGGCTGTAGCTTCTTCTCCGAGGAGAAGAAGCTACAGAAGCAAGCGAAAAGGAAGTACAGGGGAGTGAGGCAGAGGCCATGGGGAAAATGGGCAGCGGAGATTCGAGACCCGAGGCGTGCAGCACGAGTGTGGCTCGGGACATTCAGCACGGCTGAGGATGCTGCCAGGGCTTATGACAAGGCCGCCATCGAGTTCCGGGGGGCGCGAGCCAAGCTCAACTTTCCGGTGATTGATGATTCGCTTATAGTGGAGGCACATAAGGGAAACATGAATGTGTTGAATGCAGAAGAGGAAGTAGTAAAGGATGATAACTTAAGTAAGGGAATGGAAATGAAAACAGTAGGAATGTTTGGGAATAAGGAAAGTGAATTTTGGGATAGGATCGGAGAAGATGATTTTCATCAGCTTATGATGATGGATTTTGGCGGAGATTCTTCCCACTCTGCTGCGGGGAACACGTCCGGTTCTTGA	720	0.4958	MYPLTRLTSEQELSVIVAALTNVVTGSTSTSLDTTSNNVISQFSSQLTSQATSATTGGTTSDQRILPTSNIVTCSECNIAGCLGCSFFSEEKKLQKQAKRKYRGVRQRPWGKWAAEIRDPRRAARVWLGTFSTAEDAARAYDKAAIEFRGARAKLNFPVIDDSLIVEAHKGNMNVLNAEEEVVKDDNLSKGMEMKTVGMFGNKESEFWDRIGEDDFHQLMMMDFGGDSSHSAAGNTSGS*	240

Showing 1 to 1 of 1 entries

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lan17g0726	239	Pfam	AP2 domain	101	150	IPR001471	GO:0003700\|GO:0006355
Lan17g0726	239	Gene3D	AP2/ERF domain	100	160	IPR036955	GO:0003700\|GO:0006355
Lan17g0726	239	PRINTS	Ethylene responsive element binding protein signature	102	113	IPR001471	GO:0003700\|GO:0006355
Lan17g0726	239	PRINTS	Ethylene responsive element binding protein signature	124	140	IPR001471	GO:0003700\|GO:0006355
Lan17g0726	239	SUPERFAMILY	DNA-binding domain	101	159	IPR016177	GO:0003677
Lan17g0726	239	PANTHER	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109	5	233	-	-
Lan17g0726	239	ProSiteProfiles	AP2/ERF domain profile.	101	158	IPR001471	GO:0003700\|GO:0006355
Lan17g0726	239	PANTHER	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	5	233	-	-
Lan17g0726	239	CDD	AP2	101	159	IPR001471	GO:0003700\|GO:0006355
Lan17g0726	239	SMART	rav1_2	101	164	IPR001471	GO:0003700\|GO:0006355

Showing 1 to 10 of 10 entries

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan17g0726	Lan-Chr17	6697364	6698301	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan17g0726	2	161	AP2-EREBP Transcription Factor Family	AT4G34410	41.837	3.84e-35	124

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	AP2 or ERF-ERF	Lan17g0726		AP2	2.9e-14	CL0081

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan17g0726	-		-	gmx:100820426	249.595

Showing 1 to 1 of 1 entries

Show entries

Search:

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan6g0802	6	7389538	7390652	Lan17g0726	17	6697364	6698301	LSH
	Lan18g0478	18	9224007	9224937	Lan17g0726	17	6697364	6698301	LSH

Showing 1 to 2 of 2 entries