Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0718 ATGTGTTGGTCTGAGGGAGAAAGAGACATGGCACTAGAAGCAGTGGTATATCAACAAACACTACAAGACCCTTTTGGTTATGGAGTCAAAGATTTATACCACAATAACTTGCTTTCTGGTGCTACTACCTGGGGCTATGAACACCTCCTAAGCCTTGAAAATGAACAGAAGGAGAAGCAAAAAGGAGAAGGGTCTATAAGTTTTGTAGAGAACAAAACAGCACTGAGTTATGATCACTTAAATGAACTTCATAATATCTCTAATGAACCATCTTCTGAGGCCACTACTCATCATTTCAGCAACACACAGAACTTTGATACCTCAACCTGTTATCGTCCCAAAAGGCGCAGAGCAAGAAGCAGAAAGAACAGGGAAGAGATTGAGAATCAGAGAATGACTCACATTGCTGTTGAGAGAAACAGAAGGAAGCAGATGAATGAGTATCTCTCTGTTATTAAGACACTAATGCCAGAGTCTTATGTCCAAAGGGGTGATCAAGCTTCTATAATTGGAGGTGCTATTAACTTTGTTAAGGAACTTGAGCACAAGCTGCAATATATTGGTTCTCAAAAGGAAACAGAAGGAAAATCTGATGTGGTTGATGCAAATATTCCATTTTCTGAGTTCTTCACTTTTCCTCAGTATTCAACAAGTGCTAGTAGTTGTGATAATTCTGTGGACTCAAGTGAGCAACAAGTGTGTAAAGTTCAGTTTGGCATTGCTGATATAGAAGTAACAATGGTTGAAAACCATGCAAATCTCAAGATCAGATCCAAAAAGAAGCCAAAACAGCTCCTGAAGATTGTATCAGATTTACACAACATGCGCCTCACAATCTTGCACTTAAATGTTACAACCACTGGTGAAATTATCCTATACTCACTTAGTGTTAAGGTTGAAGATGATTGCGAGTTAGGATCAGTAGATGATATAGCTGCAGCTGTAAACCAAATACTGGATAGGATTCAACAAGAGACAATATTGAATTAA 990 0.3848 MCWSEGERDMALEAVVYQQTLQDPFGYGVKDLYHNNLLSGATTWGYEHLLSLENEQKEKQKGEGSISFVENKTALSYDHLNELHNISNEPSSEATTHHFSNTQNFDTSTCYRPKRRRARSRKNREEIENQRMTHIAVERNRRKQMNEYLSVIKTLMPESYVQRGDQASIIGGAINFVKELEHKLQYIGSQKETEGKSDVVDANIPFSEFFTFPQYSTSASSCDNSVDSSEQQVCKVQFGIADIEVTMVENHANLKIRSKKKPKQLLKIVSDLHNMRLTILHLNVTTTGEIILYSLSVKVEDDCELGSVDDIAAAVNQILDRIQQETILN* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0718 329 PANTHER HELIX-LOOP-HELIX-LIKE PROTEIN 10 329 - -
Lan17g0718 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 129 192 IPR036638 GO:0046983
Lan17g0718 329 SMART finulus 135 186 IPR011598 GO:0046983
Lan17g0718 329 PANTHER MAX DIMERIZATION, MAD 10 329 - -
Lan17g0718 329 Pfam Helix-loop-helix DNA-binding domain 130 181 IPR011598 GO:0046983
Lan17g0718 329 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 129 180 IPR011598 GO:0046983
Lan17g0718 329 Gene3D - 115 195 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0718 Lan-Chr17 6515094 6517038 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0718 120 299 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 55.959 2.02e-67 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan17g0718 HLH 9.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0718 - - gmx:100782243 378.637