Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0713 ATGATAGCTAGCTCCTTTTGCAATGCTGATTCTATGTTTTCAAGAGAAGAGGGAATAGATGTTAGAAAGATGATGGGTCATAAAAGAAGCCCTTGTTCTGTTGATCAAAGCAGTTATACTATTGCTTCTAAAAGGCAAAAGTCTGATATGTCTATCACCACTAAGGAGAGGAAAGATAAGCTCGGCGAACGAATCGTTGCTCTGCAGCAACTTGTTTCACCATATGGGAAGACTGATACATCTTCAGTCCTAAAGGAGGCAATGGAATACATAGGGTTCCTTCATCAACAAGTTAAGGTGCTTAGTGCCCCTTACCTCGAAAGTTCGCCGAAAACTGAGATTCAGGGTATAGAACCATGCAGCCTGAGGAGTAGAGGGTTATGTCTTGTTCCTGCCTCATTAACGATGGGAGTTGCTGATAGCAATGGTGCAGATATTTGGGCTCCCATCAAGACTACTTCACCTAAATTTGAGAAGGATGATAGTTAA 489 0.4192 MIASSFCNADSMFSREEGIDVRKMMGHKRSPCSVDQSSYTIASKRQKSDMSITTKERKDKLGERIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHQQVKVLSAPYLESSPKTEIQGIEPCSLRSRGLCLVPASLTMGVADSNGADIWAPIKTTSPKFEKDDS* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0713 162 CDD bHLH_AtbHLH_like 51 102 IPR045239 -
Lan17g0713 162 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 109 IPR036638 GO:0046983
Lan17g0713 162 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 94 IPR011598 GO:0046983
Lan17g0713 162 Gene3D - 42 113 IPR036638 GO:0046983
Lan17g0713 162 PANTHER TRANSCRIPTION FACTOR BHLH154 24 145 - -
Lan17g0713 162 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 24 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0713 Lan-Chr17 6396162 6400988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0713 24 157 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 55.414 2.33e-51 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0713 - - gmx:100527660 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0505 18 9718140 9723208 Lan17g0713 17 6396162 6400988 LSH