Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0710 ATGGAAACTCTTCCAACCAACAAGCTAGCTGAAAAATCATTAATTCTTAAAAAACCACTAGTATGCACAGGCCGTGATCGTTTATCTTCATTTTCTGTTACAGGGATAAAGAGTAATGCTACTGACATGGGAAAGAAGGGTAGTTGGTTTGCTGCAATAAAGAGGGTTTTTACACACCACTCCAAGGAAAAGGATTCAGATAATAGAAGTACAAAAGAGAAGAAGAAGGGAAAACTAAGGCATGGAGAGACCAATTCTTTCATCCCCCTCTTCAGAGAACCAAGCAGCATTGAGAAAATCTTTGGGGAGTTTGAAAGAGAGCAACAAATACTTACCATTAAGCCTCCTACACCTCCCGAGCGACCTAAAACACCACCTTTTGTCCCTCCTAGAGCTGCTTCTCCTAGAGCTCCATCTCCAAGGGCTGCTTCTCCCAGGGCTCCATCAATGCGACCGACCTCTCCTAAAGCTGCATCTTCCCGGATTGTTCATCGCCCCAAGGAGGTTGTCTACAGACCTGAACCAACTTTAAAGAACCAACATGCCTCTGCAACTAAGCTCCAGGCTGCTTTTAGAGGCTATGCTGCCAGGAGGAGTTTTAGAGCTCTAAAAGGTTTGGTGAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGGCAGACGGTTAATGCCATGAAACACATGCAGCTGTTGGTGCGAGTTCAATCTCAGATTCAATCTCGAAGGATCCAGATGCTAGAAAACCAGGCACGATATCAAGCTGAGTTCAAGAATGATAATGCAAGTACCATAGGAAAACTGTCTGAGGCACATGAAAACTGGGATGATAGCTTACTGACGAAAGAGGAAATAGAGGCAAGGTTGCAGAGGAAGGTGGAAGCAATCCTCAAAAGAGAAAGAGCAATGGCATTTGCATATTCACATCAGTTGTGGAAAGGCACTCCAAAATCAAATCAAACACCAGTGACCGATATGCGACCTGGCGGATTTCCATGGTGGTGGAACTGGTTGGAAAGACAACTTCCAGCTGCAGCAAATCCACAAGAAAGACAAATCTTAAAGAATTTCCATCTTACACCTCCGAGACCATACTCAGAACAAAAGACTAGTCCAAGACCAACCTCAAGTACTCCTATGCAGCATCATTTTGTCTTTGATAATATGGACACTCCAACCCCGAAATCGACTAAATCAACTATAGTGACATCTTCAAAACCTGCAAGAACTCCTCCATACAGAACTCCACAAGCAAACAGCTCAAAGTATTCAAGGCCAAGGGCTATTGCAGCACATTCACCTTTTGATGTTCCACTAAAGGATGATGAAAGTCTCACTAGCTGCCCTCCATTTTCAGTGCCAAACTTCATGGCTCCAACAGCTTCGGCTACGGCCAAAGTTCGCGCTAATAGTAATCCAAGAGAAAGGTTTGGTGGGACTCCAACCAGTGAATCATCAAAGAGAAGATCTTCATTTCCTTTGTCACAAGGAATTGGATCCTTCAAATGGACTAAAGGGTCATTGTTCTCAAACAAGGATTCTAGCTCTAAGAGGGTGCCTGATAAATATAACTCACTTGAGTCTATAGGAAACATGAGTGTGGATTCAACAGTGTCTATGCCTGCAGCAATGGGAAGAAAACCATTTACAAGATTTGTGTGA 1662 0.4368 METLPTNKLAEKSLILKKPLVCTGRDRLSSFSVTGIKSNATDMGKKGSWFAAIKRVFTHHSKEKDSDNRSTKEKKKGKLRHGETNSFIPLFREPSSIEKIFGEFEREQQILTIKPPTPPERPKTPPFVPPRAASPRAPSPRAASPRAPSMRPTSPKAASSRIVHRPKEVVYRPEPTLKNQHASATKLQAAFRGYAARRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDNASTIGKLSEAHENWDDSLLTKEEIEARLQRKVEAILKRERAMAFAYSHQLWKGTPKSNQTPVTDMRPGGFPWWWNWLERQLPAAANPQERQILKNFHLTPPRPYSEQKTSPRPTSSTPMQHHFVFDNMDTPTPKSTKSTIVTSSKPARTPPYRTPQANSSKYSRPRAIAAHSPFDVPLKDDESLTSCPPFSVPNFMAPTASATAKVRANSNPRERFGGTPTSESSKRRSSFPLSQGIGSFKWTKGSLFSNKDSSSKRVPDKYNSLESIGNMSVDSTVSMPAAMGRKPFTRFV* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0710 553 SMART iq_5 179 201 IPR000048 GO:0005515
Lan17g0710 553 MobiDBLite consensus disorder prediction 111 168 - -
Lan17g0710 553 PANTHER IQ-DOMAIN 13 43 550 - -
Lan17g0710 553 ProSiteProfiles IQ motif profile. 180 208 IPR000048 GO:0005515
Lan17g0710 553 MobiDBLite consensus disorder prediction 115 136 - -
Lan17g0710 553 Pfam IQ calmodulin-binding motif 181 201 IPR000048 GO:0005515
Lan17g0710 553 PANTHER IQ-DOMAIN 5-RELATED 43 550 - -
Lan17g0710 553 Pfam Protein of unknown function (DUF4005) 411 497 IPR025064 -
Lan17g0710 553 Gene3D - 177 231 - -
Lan17g0710 553 MobiDBLite consensus disorder prediction 357 426 - -
Lan17g0710 553 MobiDBLite consensus disorder prediction 60 87 - -
Lan17g0710 553 MobiDBLite consensus disorder prediction 363 426 - -
Lan17g0710 553 MobiDBLite consensus disorder prediction 60 82 - -
Lan17g0710 553 MobiDBLite consensus disorder prediction 464 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0710 Lan-Chr17 6367754 6372648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0710 43 552 IQD Protein Family AT3G59690 52.166 4.16e-168 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0710 - - lang:109331805 1028.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0776 6 7161070 7166207 Lan17g0710 17 6367754 6372648 LSH
Lan18g0509 18 9752446 9757719 Lan17g0710 17 6367754 6372648 LSH