Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0709 ATGGATGAGTTTTGGACACCATTTTCCATACCAACAACAAATCCAACAACCACTATAGCCACCACTAGTGCCTCACGCATAAGCCACTCATCACAAATCATGGATCATCCTCAAAACGTTGTCTTTTCCGATCATACTGAACCACCTCATTTTAATCCTATAACTCCTTCTCCCCCTATGTTGTACGTTCCACCACCTTACATTGCACCATATGATCAGAACTTAGGGGAACCCTTTATGCGTATGAATCAGCCTAGTCTTAGTAGTTATCCCATGTATTCCGCTCCAGTGGAGCCAAGCAATCTTGTTAACCCAAGACATGAATCTCAAGGTTTGTCCCAATCAAGGGAAGAAAATATGATGATGAATGATGCATTGACAGCTAAGGTTGCTAGGTATAGAAGGAAACAAGCAAGACAAAGGGTTAGAAGTAGTTCTACTATTGGGGTCCCTTCAATACCAGAGGGAACAATAAGGGGACAACCTCAAGCCACCCATGTTTTCTATGCTCCAAATGGGAAGATGCTCACACAATTTTTGACAAAGAAGTTGAGAAATAGTGATGTTGGCAACGTTGGGCGCATTGTTATCCCAAAGAGAGGGGCTGAGGAAATGCTTCCAACCCTCTGCAACAAGGAAGGAACCAATATTCTACTTCAGGATGTATATTCAGACCTTAAATGGAGCTTCAAATACAAGTACTGGTCTAATAACAAAAGTCATAGAATGTATGTTCTTGAGAATACAGTGGATTTTGTTAACCATTATGAATTACGAGTGGGAGATTCTATAACTCTTTACAAGGACGAGTTTACAAATCTGTATGTGTCTGCCAACAAAGAGCAAAATCTTGAAGAACCTGAGGATTCATCAAGCATAAAAGGGACACAAACACATGGCACAGACAATTATAACTACATGCATACAGCTATAAACCAAGCTATAGATGAAGAAGAACAAGCATCATTTACTTTATTGTTGAATGAGCTTGGACATAATAGGGATGAAGATGTCACTAACGACATTTTGACCATCTACAATGATGGAGGTTCTTCAAGTTGA 1062 0.3992 MDEFWTPFSIPTTNPTTTIATTSASRISHSSQIMDHPQNVVFSDHTEPPHFNPITPSPPMLYVPPPYIAPYDQNLGEPFMRMNQPSLSSYPMYSAPVEPSNLVNPRHESQGLSQSREENMMMNDALTAKVARYRRKQARQRVRSSSTIGVPSIPEGTIRGQPQATHVFYAPNGKMLTQFLTKKLRNSDVGNVGRIVIPKRGAEEMLPTLCNKEGTNILLQDVYSDLKWSFKYKYWSNNKSHRMYVLENTVDFVNHYELRVGDSITLYKDEFTNLYVSANKEQNLEEPEDSSSIKGTQTHGTDNYNYMHTAINQAIDEEEQASFTLLLNELGHNRDEDVTNDILTIYNDGGSSS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0709 353 MobiDBLite consensus disorder prediction 282 301 - -
Lan17g0709 353 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 5 348 IPR044800 GO:0003700
Lan17g0709 353 CDD B3_DNA 179 276 IPR003340 GO:0003677
Lan17g0709 353 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR LEC2 ISOFORM X1 5 348 - -
Lan17g0709 353 SUPERFAMILY DNA-binding pseudobarrel domain 179 277 IPR015300 -
Lan17g0709 353 ProSiteProfiles B3 DNA-binding domain profile. 180 282 IPR003340 GO:0003677
Lan17g0709 353 MobiDBLite consensus disorder prediction 135 156 - -
Lan17g0709 353 Gene3D - 170 290 IPR015300 -
Lan17g0709 353 Pfam B3 DNA binding domain 181 276 IPR003340 GO:0003677
Lan17g0709 353 SMART B3_2 180 282 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0709 Lan-Chr17 6324958 6328100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0709 172 348 B3 DNA Binding Superfamily AT1G28300 40.113 1.94e-34 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lan17g0709 B3 1.2e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0709 - - lang:109331074 663.685