Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0698 ATGGCTCTTCCATGCGACTCTGATGGCATTTGCATGTTCTGCAAAACCAAACCAACAATTCTTGAATCTCTCATTTGCAAGACATGCATCACCCCTTGGCACGTTCCTTGTCTCCCCGTTAACGATCGCCCTGTTAACATGGCCGATGCCGAGAAATGGGTATGCCCTGATTGTACTATCATGTCCATTGAACCGGTTACTCGGTGCAACCATGGTGGTGGTGGTTCAATTGTGGCTGCAGTTCGGGTGATTCAATTGGATGCTAGGTTGAGTGATGAAGAGAAAGATAAGAAGCGTCAAGAGCTTTTGATTGGGTCATTGAAAGTGACTGATGGGAATTGTGCTGAAGGAGATGTGATGAATAGTGTGCTGGATGTTTTTGATGGAAGTGAGTGCTCTATTTGCATGCAGTTACCGGAAAGACCTGTCACGACTCCATGTGGTCATAACTTCTGTCTTAGGTGTTTTGAAAAATGGATTTCACAAGGCAGCGGTAAATGTGCCAATTGCCGTTGCCTATTGCCACCAAAGATGGCGAAAAACCCTCGAATCAACTCTCAACTTGCCCTTGCCATCCGAATGGCAAAGATGGCAAGATCAGGGTGTGATGTTCCTGGGGGTCCGCCTAAGATCTATCAGTTTATCCATAATCAAGACCGTCCAGACTCGGCTTTCACCACTGAGAGAGCTAAGAAGCCTGGGCTAGCAAATGCTTGCAGTGGGAAGATCCTTGTTACTGTTCCCCAAGACCATTTAGGACCCATCCCTGCTGAGAATGACCCTACAAGGAATCGCGGTGTTTTGGTGGGAGATACCTGGACGAGTAGGATGGCATGTAGACAGTGGGGTGCTCATTTTCCACATATTTCTGGCATTTGTGGCCAGAGTACTTTTGGTGCTCAGTCTGTTGCCCTTTCTGGAGGGTATGTTGATGATGAAGACCACGGCGAGTGGTTCCTCTACACTGGCAGTGGTGGAAGAGATCTCAGTGGCAACAAACGCACTAACAAGAACCAGTCATTCGATCAGAAATTTGAGAACATGAATGAGGCCCTCAGATTAAGTTGCCTAAAGGGCTATCCCGTGCGGGTTGTACGGTCTTCGAAAGAGAAACGTTCTGCTTATGCACCAGATGAAGGAGTCAGATATGATGGAATCTATAGAATAGAGAAATGCTGGCGCAAAGTTGGAAAACAAGGTTGCAAGGTATGCAGATATTTGTTTGTGCGATGTGACAATGAGCCAGCCCCGTGGACAAGTAATGATTGTGGAGACCGCCCACGGCCACTGCCTAAAATTGAGGAATTGAAGGGTGCAGTTGATTTAACTGAAAGGAAGGAAGCTCCATCATGGGATTATGATGAAGAGAAGGGCTGCTGGTTGTGGAAGAGGCCTCCACCAGAAAGCAGGAAATTAGCAGGCACGGTAAGCCCTGTGAACGGAAAGACAGGAAAAGTTAAACGAAAAGTGAAAACTGCATCTGTGAAAGAAAAGCTACTCAAAGAGTTTGCTTGCCAAATCTGTCGCAAGGTGTTGGCTAATCCTCTTACAACACCTTGTGCTCACAATTTTTGTAAAGCCTGTCTGGAGGGTGTTTTTTCTGGCCAAAGTTTTGTCAGAGAAAGGGCCTGCCAAAGTGGACGTTCATTACGTACACAAAAGAACATCATGAAATGCCCATCATGCCAAAATGACATAGCTGAGTTTCTGCAAAATCCACAGATTAACAGACCAATGATGGGTATCATAGAAGCACTCCAACGCGAGGCTGAACAGATGGAGGAGAACTCTTCAGAGTCAAGTGAGAAGAATGATGAAAATGAGAAGAATGTGAGTGAAGTTTCAGAGCAGTGTGATTCAAGTGAGGAAGTGTTGGAGGAGATCAAAGACAACAATATGAACCGGACAAAGAAGTTAAGGAAATGTGCCAAAGGTGCAGTTGTGGAGAACAAAGAGGAACATAATGATGAAGCAAGTGATGTAAAGGGGAATGAGGGGAGAGGCAAAAGGGACTTAGCAAGTAGCAACATGCATGTGATGGTTTGA 2046 0.4585 MALPCDSDGICMFCKTKPTILESLICKTCITPWHVPCLPVNDRPVNMADAEKWVCPDCTIMSIEPVTRCNHGGGGSIVAAVRVIQLDARLSDEEKDKKRQELLIGSLKVTDGNCAEGDVMNSVLDVFDGSECSICMQLPERPVTTPCGHNFCLRCFEKWISQGSGKCANCRCLLPPKMAKNPRINSQLALAIRMAKMARSGCDVPGGPPKIYQFIHNQDRPDSAFTTERAKKPGLANACSGKILVTVPQDHLGPIPAENDPTRNRGVLVGDTWTSRMACRQWGAHFPHISGICGQSTFGAQSVALSGGYVDDEDHGEWFLYTGSGGRDLSGNKRTNKNQSFDQKFENMNEALRLSCLKGYPVRVVRSSKEKRSAYAPDEGVRYDGIYRIEKCWRKVGKQGCKVCRYLFVRCDNEPAPWTSNDCGDRPRPLPKIEELKGAVDLTERKEAPSWDYDEEKGCWLWKRPPPESRKLAGTVSPVNGKTGKVKRKVKTASVKEKLLKEFACQICRKVLANPLTTPCAHNFCKACLEGVFSGQSFVRERACQSGRSLRTQKNIMKCPSCQNDIAEFLQNPQINRPMMGIIEALQREAEQMEENSSESSEKNDENEKNVSEVSEQCDSSEEVLEEIKDNNMNRTKKLRKCAKGAVVENKEEHNDEASDVKGNEGRGKRDLASSNMHVMV* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0698 681 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 2 659 - -
Lan17g0698 681 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 63 IPR013083 -
Lan17g0698 681 ProSitePatterns Zinc finger PHD-type signature. 11 58 IPR019786 -
Lan17g0698 681 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 198 IPR013083 -
Lan17g0698 681 ProSitePatterns Zinc finger RING-type signature. 520 529 IPR017907 -
Lan17g0698 681 Pfam RING-type zinc-finger 505 560 IPR027370 -
Lan17g0698 681 SUPERFAMILY FYVE/PHD zinc finger 4 61 IPR011011 -
Lan17g0698 681 ProSiteProfiles Zinc finger RING-type profile. 505 563 IPR001841 -
Lan17g0698 681 Gene3D - 233 427 IPR036987 -
Lan17g0698 681 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 2 659 IPR045134 -
Lan17g0698 681 SMART ring_2 132 170 IPR001841 -
Lan17g0698 681 SMART ring_2 505 562 IPR001841 -
Lan17g0698 681 SUPERFAMILY RING/U-box 497 588 - -
Lan17g0698 681 ProSiteProfiles YDG domain profile. 262 410 IPR003105 -
Lan17g0698 681 SMART PHD_3 10 59 IPR001965 -
Lan17g0698 681 MobiDBLite consensus disorder prediction 589 672 - -
Lan17g0698 681 SUPERFAMILY PUA domain-like 235 429 IPR015947 -
Lan17g0698 681 SUPERFAMILY RING/U-box 128 181 - -
Lan17g0698 681 Pfam SAD/SRA domain 265 413 IPR003105 -
Lan17g0698 681 Pfam Zinc finger, C3HC4 type (RING finger) 132 170 IPR018957 GO:0046872
Lan17g0698 681 SMART G9a_1 257 414 IPR003105 -
Lan17g0698 681 MobiDBLite consensus disorder prediction 589 681 - -
Lan17g0698 681 Coils Coil 583 631 - -
Lan17g0698 681 CDD RING-HC 132 170 - -
Lan17g0698 681 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 484 613 IPR013083 -
Lan17g0698 681 ProSiteProfiles Zinc finger RING-type profile. 132 171 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0698 Lan-Chr17 6191624 6199207 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0698 3 594 C2H2 Transcription Factor Family AT5G39550 59.500 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0698 K10638 - gmx:100786796 908.672