Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0692 ATGGATAGCACAGATTCATCAACATGCTCTCAGCATCCTCAACTCCCTCCAGGGTTTCGGTTCCACCCAACTGATGAGGAACTCGTGGTTCACTACCTCAAGAAAAAAATTGCATCTATACCTCTTCCTGTGTCCATCATCGCTGAGGTTGATATCTACAAGTTTGACCCTTGGGAGCTACCAAGTAAAGCAGTGTTTGGTGAGCAAGAATGGTACTTTTTCAGTCCAAGGGATAGGAAGTACCCTAATGGGGCAAGACCAAACAGGGCAGCAACTTCTGGGTATTGGAAAGCCACTGGGACTGATAAGCCTATAGTAACATCTGATGGGCATCAAAAAGTTGGAGTGAAGAAAGCACTTGTTTTTTATGGTGGGAAGCCTCCAAAAGGAGTTAAAACCAATTGGATCATGCATGAGTATAGGGTTGTTGTTAATAATAATAATTCCCTTATTTCTAGCTCTAATAATCCTCCTCCTCTGCCTGCTGATCCTCCACTCAATAACAAGAAATCTCTCAGGCTTGATGATTGGGTTTTGTGTCGAATATACAAGAAAAACAACAATAGCACAATGCCAAGGCCACCCTTGATGGAGCATGATAATGAGCTTTCTATGGAGACCATGCTACCTACTATATCAACTTTGTCAATGGCTAATTACACAAACCATAACTCTAAACTTCTATCATCAAGAAATAATGGCTATGCACCACTAGTACTTGATCAAAATGATGACAACTTCTTCAATGGAATCTTAGCAGCTGATCAGAACATGCAAAATGGGTTATCTTCCTCTCCAAGCAAACGATTTCGCGGCGATCTTAATGGTGGAAGCATCACCATTGCTGAGGAAAACAATTCTTTTGTGTCTTTGCTTAGCCAACTTCCTCAAAATGCAACATTTCACTCAAATGCAATTCTTGGGGATGGTGTAATGAGGCAACAATTTCAACTTCCAGGCATAAATTGGAACTAA 975 0.4113 MDSTDSSTCSQHPQLPPGFRFHPTDEELVVHYLKKKIASIPLPVSIIAEVDIYKFDPWELPSKAVFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIVTSDGHQKVGVKKALVFYGGKPPKGVKTNWIMHEYRVVVNNNNSLISSSNNPPPLPADPPLNNKKSLRLDDWVLCRIYKKNNNSTMPRPPLMEHDNELSMETMLPTISTLSMANYTNHNSKLLSSRNNGYAPLVLDQNDDNFFNGILAADQNMQNGLSSSPSKRFRGDLNGGSITIAEENNSFVSLLSQLPQNATFHSNAILGDGVMRQQFQLPGINWN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0692 324 ProSiteProfiles NAC domain profile. 15 185 IPR003441 GO:0003677|GO:0006355
Lan17g0692 324 MobiDBLite consensus disorder prediction 1 20 - -
Lan17g0692 324 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Lan17g0692 324 PANTHER NAC TRANSCRIPTION FACTOR 56 1 265 - -
Lan17g0692 324 SUPERFAMILY NAC domain 8 186 IPR036093 GO:0003677|GO:0006355
Lan17g0692 324 Gene3D NAC domain 24 190 IPR036093 GO:0003677|GO:0006355
Lan17g0692 324 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0692 Lan-Chr17 6100070 6102492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0692 5 324 NAC Transcription Factor Family AT1G61110 54.046 3.50e-110 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan17g0692 NAM 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0692 - - gmx:100797132 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0692 17 6100070 6102492 Lan19g0958 19 16923512 16925183 PCT
Lan19g0958 19 16923512 16925183 Lan17g0692 17 6100070 6102492 PCT