Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0691 ATGGATAACATTGTAGTAGTAAAGCTGACAAGTTTATTATACACCTTATCTCTTTTACTTTTTCTATGTTTTAAGCCTATAGCTTCTTCTAGACATAGGCAATGGAATGGTGGGAGGAAATTGAGCTTTGGTGATAATGGTGATCTTGTCACTAATTTGCCTAGTCAACCTCATGTAGATTTCCAACACTATGCTGGCTATGTCATGGTTAATGAAACCAATGGAAGAGCACTCTTTTACTGGTTTTATGAAGCTATGACCAATCCACAAGAGAAGCCATTAGTGCTATGGCTTAATGGAGGACCTGGATGCTCTTCTGTGGGATATGGAGCAACACAAGAGATTGGTCCATTTTTAGTTGATAGTGATGGTCAGGGCCTTAAATTTAATAACTTCTCATGGAACAGAGAAGCCAACATGTTATTCCTGGAATCTCCTGTTGGAGTTGGCTTTTCCTACTCAAATACAACAAGTGACTATGAACAATTGGGAGATGACTTGACAGCTAATGATGCTTACTCTTTTCTACACAATTGGTTCCTCAAGTTTCCATCATATAGAACAAGGACATTTTACATAGCAGGGGAGAGCTATGCAGGAAAGTATGTACCAGAGCTGGCTGAACTCATTCTTGATAGGAACAATGACCCTTCCCTTCATATTAATCTCAAGGGAATTTTGCTAGGTAACCCTGAAACATCTGATGCTGAGGATTGGATAGGTCTTGTTGATTATGCTTGGAGCCATGCTGTGATATCTGATGAAACTCACAAAATAATCAGAAAAAGTTGTGACTTTAACAACAGTGATCCATGGACTAATGAAGATTGTACTAAAGGTGTAGGTGAAGTATTCAAACAGTACAAGGAGATTGATATCTACAGCCTCTATACCTCTGTCTGCTTTGCCAGTACCGCGAGCTCGAACGATCAATCGATGCAAAGGCGCTTGTTACGAATGATGCCTAGCATAATGGGTGGTTATGATCCTTGCTTGGATGGTTATGCTAAAGCTTATTATAATAGACCAGATGTTCAAAAGGCTCTGCATGCAAGTGATGGTTACAATCTAAAGAATTGGACTATTTGCAACAACAAGATATTTGATGACTGGGCAGATTCTAAGCCATCTGTGATCCCAATTTACAAGAAGCTTATTTCAGCAAAACTTAGAATTTGGGTTTACAGTGGAGACACTGATGGTAGAGTACCGGTGTTGTCAACAAGGTACAGCTTAAGTACTCTATCTTTGCCTGTTACTAAGCAATGGAGTCCTTGGTACCATGAAAATCAGGTTAGCGGGTGGTATGAAGAATATGAGGGGCTTACATTTGCAACATTTAGAGGAGCTGGCCATGCAGTTCCATGTTTTAAACCAAGCAACTCACTTGCATTTTTCTCATATTTTCTTCGTGGAGAATCACCACCTTCTACAAAATAA 1440 0.3951 MDNIVVVKLTSLLYTLSLLLFLCFKPIASSRHRQWNGGRKLSFGDNGDLVTNLPSQPHVDFQHYAGYVMVNETNGRALFYWFYEAMTNPQEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDSDGQGLKFNNFSWNREANMLFLESPVGVGFSYSNTTSDYEQLGDDLTANDAYSFLHNWFLKFPSYRTRTFYIAGESYAGKYVPELAELILDRNNDPSLHINLKGILLGNPETSDAEDWIGLVDYAWSHAVISDETHKIIRKSCDFNNSDPWTNEDCTKGVGEVFKQYKEIDIYSLYTSVCFASTASSNDQSMQRRLLRMMPSIMGGYDPCLDGYAKAYYNRPDVQKALHASDGYNLKNWTICNNKIFDDWADSKPSVIPIYKKLISAKLRIWVYSGDTDGRVPVLSTRYSLSTLSLPVTKQWSPWYHENQVSGWYEEYEGLTFATFRGAGHAVPCFKPSNSLAFFSYFLRGESPPSTK* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0691 479 Gene3D - 331 369 - -
Lan17g0691 479 Pfam Serine carboxypeptidase 57 471 IPR001563 GO:0004185|GO:0006508
Lan17g0691 479 Gene3D - 378 472 - -
Lan17g0691 479 PANTHER CARBOXYPEPTIDASE 11 476 - -
Lan17g0691 479 SUPERFAMILY alpha/beta-Hydrolases 46 473 IPR029058 -
Lan17g0691 479 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 11 476 IPR001563 GO:0004185|GO:0006508
Lan17g0691 479 ProSitePatterns Serine carboxypeptidases, serine active site. 193 200 IPR018202 GO:0004185
Lan17g0691 479 Gene3D alpha/beta hydrolase 45 303 IPR029058 -
Lan17g0691 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 142 IPR001563 GO:0004185|GO:0006508
Lan17g0691 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 143 153 IPR001563 GO:0004185|GO:0006508
Lan17g0691 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 204 IPR001563 GO:0004185|GO:0006508
Lan17g0691 479 PRINTS Carboxypeptidase C serine protease (S10) family signature 442 455 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0691 Lan-Chr17 6091884 6096338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0691 334 473 Calmodulin-binding Proteins AT2G22960 33.333 1.78e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0691 K16297 - gmx:100815993 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0691 17 6091884 6096338 Lan6g0711 6 6304578 6315946 LSH