LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan17g0685	ATGATGATTAAATGGGGCTCTTGGGAGGAGCTGCTACTAGGTGGAGCTGTTCTCAGGCACGGGACCCAAGACTGGACCGCCGTCGCCGCCAAGCTCCGGTACCGGATCGTTTCTCCTGACACTTACACTCCGGAGGTTTGTGAAGCAAAGTATCAAGAGTTGCTGAAGCGATATTCTGGGAGCAAGGATTGGTTTGAGGAACTTAAGAAGGAAGGAGTGGCAGAGCTTAAGAGAGCTTTGGAGCAATCTGAAAAATCAATTGGGTCTCTTGAATCAAAGCTTGAATCCCTTAAGACTGAGAAGAATGAGAGAAAAATTGATTGTCATGTTGACAATGGCTCGGCTGGACCTGAATTACATGTTCCTTCTAAGAATTCGGAGAGAGTGGAATCATCCAACAGAGGGACATCAAAGGATGGGCTATCTGCTGGGAGTTTCACGCATGAAACCCGGACAAACATGTCTCCCGTGTGCCAGGTTCCGGTTGTGTCTTCGGAGGACATAGAGATTAAGCCTGAATGTTCCCGGTCTGATGAACAAGAGAAAGAATTGAATGTAGATAAGTTGGAAGATCCTATAGGTGAAGGACAGGTAGGGGGCCTAAAAAAGCAAAGAGGGAGGAGGAAGAGGAAGGATTCTGACAGAAATATAAATGAAACAAGTGATCGGGAAAGTAACATGACAACTTCTGTAGATGTGTCCGGATGTAAAGAAGGTTCAACCAGCAACTTTGATGAGGTTGCAAAATCTTCTGACAAAGATGAGAAGAATAAGAACTTGAGAAAGGATAGAATGAAAGATCTAATGGAGATTTTGGATTCTATTTTGAAATTTAAGGGTCCTTCATTCCATCGCAAACATGATAGCCAGAAGAGAGGCAGGTACAGGAAGATGATCCGGCAGCACATGGACCTTGACACTATAAGGTCAAGAATCAGCAACAGAACAATTACTTCAGTTGTGGAACTTTTCAGAGACTTGCATCTACTCATCAACAATGCTCTAGTCTTCTACTCCAAGAGCACTTACCAGTATAAAAATGCTCAACTTCTTAGAGACATGGTCAACGAAAGGTTAAAGGAATCCATCAAAGATTTTAGCAGCAGTGTCACCAATGCTAATGTTTCTACCACATTAGCTGTCAATGAGCCTCCCCTGAAACTCAGAACTGTATGCCCTGGTAACCGAAAGATCGTTGCGAAGGAATCAGGTGGCGGCAGCAACTCTACTTCTGAGGAATCCTTGCACGTCAAGAAATCTTGTGGTTGA	1269	0.4413	MMIKWGSWEELLLGGAVLRHGTQDWTAVAAKLRYRIVSPDTYTPEVCEAKYQELLKRYSGSKDWFEELKKEGVAELKRALEQSEKSIGSLESKLESLKTEKNERKIDCHVDNGSAGPELHVPSKNSERVESSNRGTSKDGLSAGSFTHETRTNMSPVCQVPVVSSEDIEIKPECSRSDEQEKELNVDKLEDPIGEGQVGGLKKQRGRRKRKDSDRNINETSDRESNMTTSVDVSGCKEGSTSNFDEVAKSSDKDEKNKNLRKDRMKDLMEILDSILKFKGPSFHRKHDSQKRGRYRKMIRQHMDLDTIRSRISNRTITSVVELFRDLHLLINNALVFYSKSTYQYKNAQLLRDMVNERLKESIKDFSSSVTNANVSTTLAVNEPPLKLRTVCPGNRKIVAKESGGGSNSTSEESLHVKKSCG*	423

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan17g0685	422	MobiDBLite	consensus disorder prediction	135	160	-	-
	Lan17g0685	422	SUPERFAMILY	Bromodomain	253	364	IPR036427	GO:0005515
	Lan17g0685	422	MobiDBLite	consensus disorder prediction	222	246	-	-
	Lan17g0685	422	CDD	Bromodomain	264	359	-	-
	Lan17g0685	422	PANTHER	BROMODOMAIN-CONTAINING PROTEIN 8	2	420	-	-
	Lan17g0685	422	MobiDBLite	consensus disorder prediction	104	259	-	-
	Lan17g0685	422	MobiDBLite	consensus disorder prediction	399	422	-	-
	Lan17g0685	422	Pfam	Bromodomain	283	349	IPR001487	GO:0005515
	Lan17g0685	422	PANTHER	BROMODOMAIN PROTEIN	2	420	-	-
	Lan17g0685	422	SMART	bromo_6	261	364	IPR001487	GO:0005515
	Lan17g0685	422	ProSiteProfiles	Bromodomain profile.	283	345	IPR001487	GO:0005515
	Lan17g0685	422	Coils	Coil	73	100	-	-
	Lan17g0685	422	MobiDBLite	consensus disorder prediction	169	190	-	-
	Lan17g0685	422	MobiDBLite	consensus disorder prediction	402	422	-	-
	Lan17g0685	422	Gene3D	-	234	377	IPR036427	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan17g0685	Lan-Chr17	6032420	6037594	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan17g0685	-		-	gmx:100804245	478.404

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan17g0685	17	6032420	6037594	Lan6g0708	6	6266784	6271986	LSH
	Lan17g0685	17	6032420	6037594	Lan4g0700	4	9418172	9422121	PCT
	Lan17g0685	17	6032420	6037594	Lan19g0965	19	17035033	17038426	PCT
	Lan4g0700	4	9418172	9422121	Lan17g0685	17	6032420	6037594	PCT
	Lan19g0965	19	17035033	17038426	Lan17g0685	17	6032420	6037594	PCT