Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0681 ATGATCCAATTCAAATCTTCAGCTATGTCCACTCACACAGACTCTTCTCCCATTCCTTCCATTACCACACTACCACTCAACCTCCACTTCAATCTTCATCATGTTCTTCCTCTACTATTACTACTTTTTATTCTTATACAGTTTCCACCGCCGGCAACCGCACAGTTACCAAACACACTGACACCTCCTCCACCTGACAATACTATTTCCAATGTCCAGTTCAATAAATCTATGGTCATGGCCCTCGTGATCCTGGTCGTTGTGTTCGTACTATTGGGTTTCGTTTCTGTCTACACTCGCCAGTGCACAGAGCGAAGAATGAGAGGAAGACACGACCTTTCGATCCCAATTATCGGAAGTAACCACCGGCCACGTGGCCTAGACCGGGAGATAATTGAAACCTTCCCAACCTTCATATACTCCACCGTGAAGAGCCTCAAGATAGGAATGGCCACGCTAGAATGCGCCGTGTGCTTAAACGAGTTTCAAGACGATGAAAAACTGCGTTTGATCCCAGTTTGTAACCACGTGTTTCACGCTGAATGCATCGATGCTTGGTTAGTTAATCACTCCACATGCCCTGTTTGTCGCGCCAACCTTGTTTCCACACCAAGCGAAGTTGTTCCCTTTATGACGATTCAACTTCCGGATCAAACCGACCCGGAACCGGACCCGGTCCACGTTGATGAATTCAGTGGAAGACAAGGTACAGTGATGAAGGAGTCTCCGAAGTTGAGTAATAACAATTCGGTTAATCAGAACCGTCCACGTAGATCAAGGTCAACTGGGTTTAGATTCACGAATTTGCTTCCACGCTCTCACTCGCTGGTTCAACGCGGTGAGAATTTGGAGAGGTTCACGTTGAGGTTGCCGGAGGAGGTGAGGAATCAATTGGTGACGTCAACGCTTAGCCGCACGAAGAGTTTAGGCGTAGCTTTCACACCCGAGAGTAGTGAGAGGAGGGGTTATAGGACACGAAGTGTTGGCAGTGGCTGTGGGAGGAACAATCTCGAGCGGTTGGACCAGTCGGATCGGAGAATGTTTCGTTGGATGAGTAGAGCGGGTTCCAACATATCAAAGAAGGTTACTGAGTTTAATAAAGATGACGTGGGAGAACGATCATCGGACCGGCTATTTTCTGGAAAGGAAAATGATATGTGA 1161 0.4746 MIQFKSSAMSTHTDSSPIPSITTLPLNLHFNLHHVLPLLLLLFILIQFPPPATAQLPNTLTPPPPDNTISNVQFNKSMVMALVILVVVFVLLGFVSVYTRQCTERRMRGRHDLSIPIIGSNHRPRGLDREIIETFPTFIYSTVKSLKIGMATLECAVCLNEFQDDEKLRLIPVCNHVFHAECIDAWLVNHSTCPVCRANLVSTPSEVVPFMTIQLPDQTDPEPDPVHVDEFSGRQGTVMKESPKLSNNNSVNQNRPRRSRSTGFRFTNLLPRSHSLVQRGENLERFTLRLPEEVRNQLVTSTLSRTKSLGVAFTPESSERRGYRTRSVGSGCGRNNLERLDQSDRRMFRWMSRAGSNISKKVTEFNKDDVGERSSDRLFSGKENDM* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0681 386 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 202 IPR013083 -
Lan17g0681 386 ProSiteProfiles Zinc finger RING-type profile. 155 197 IPR001841 -
Lan17g0681 386 PANTHER RING-H2 FINGER PROTEIN ATL11 38 317 - -
Lan17g0681 386 PANTHER RING FINGER DOMAIN-CONTAINING 38 317 - -
Lan17g0681 386 SUPERFAMILY RING/U-box 149 203 - -
Lan17g0681 386 Pfam Ring finger domain 154 197 IPR001841 -
Lan17g0681 386 CDD RING-H2_EL5_like 154 197 - -
Lan17g0681 386 MobiDBLite consensus disorder prediction 239 262 - -
Lan17g0681 386 MobiDBLite consensus disorder prediction 237 262 - -
Lan17g0681 386 SMART ring_2 155 196 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0681 Lan-Chr17 5932477 5934075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0681 29 363 Rapid Response to Elicitors AT3G05200 36.813 4.24e-55 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0681 K10664 - lang:109340337 354.369