Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0663 ATGGAGATTTCATCCATCAGAGGGTTAGCTGATATGGAAATGATGGAGGATCCTACCTTTCTGCAGTGGCACTTGAGCACTATTGATGACCCTGCTGCTGTTTTAAAACATCATCCATTCTATTACCAGGACTTCAACTCCGAAACTTCCATGGATCAGACATCGGAGGCACAATTTGTTTCTTACCCGAACATTCTTTCATTTGTGGATTCAACATACATTAATCAGTCGGGGTTAGTAAAGGCGAAGGATGAGATGGTTTGTCCTAAAATCGACAGAACAAATCCTCCAAACATGATACATCAAAGAACCTTGGAGATAGGGAATCAAAACTATGTCTTCATGGCCTGCGAGGATGCCAAAAAGGTCGTGGCGCGTCCTAAACTTTCTCAACCTCAAGACCACATAATAGCTGAGCGGAAACGGAGAGAGAAGCTCAGCCAGCGCTTCATTGCTCTATCTGCCCTTGTTCCTGCACTACAAAAGATGGACAAAGCTTCTATACTTGGAGGTGCTATAAAGTACTTGAAGCAATTGCAGGAGAAAGTGATGGCTCTTGAGGAGGAAAAGAACAAGAAGAAAAACATGCAATCTGTGGTAATTGTGAAGAAATGTCAACTACTCAATGATGCTGAACATTCTTCTTCAGAATCTGGTGATCCCTTTGATGAGGCACTACCTGAGATTGAAGCAAGGTTCTGTGAGAGAAATGTCCTCATAAGAGTTCACTGTGAGAAGACCAAAGGAGTTGTAGAAAAAACAATCAATGAAGTTGAGAAAATCCATCTGAAAGTCACCAATAGCAGTGCCATGGCATTTGGAAGTTGTGCCATTGATATAACAATTCTTGCTCAGATGGATATGGAATTTTGCATTACAGTGAAGGATCTGGTGAGAAACCTACGCTCAGCTTTTGCATCTTTCATGTGA 930 0.4183 MEISSIRGLADMEMMEDPTFLQWHLSTIDDPAAVLKHHPFYYQDFNSETSMDQTSEAQFVSYPNILSFVDSTYINQSGLVKAKDEMVCPKIDRTNPPNMIHQRTLEIGNQNYVFMACEDAKKVVARPKLSQPQDHIIAERKRREKLSQRFIALSALVPALQKMDKASILGGAIKYLKQLQEKVMALEEEKNKKKNMQSVVIVKKCQLLNDAEHSSSESGDPFDEALPEIEARFCERNVLIRVHCEKTKGVVEKTINEVEKIHLKVTNSSAMAFGSCAIDITILAQMDMEFCITVKDLVRNLRSAFASFM* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0663 309 Coils Coil 169 196 - -
Lan17g0663 309 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 134 196 IPR036638 GO:0046983
Lan17g0663 309 PANTHER SYMBIOTIC AMMONIUM TRANSPORTER 45 308 - -
Lan17g0663 309 Gene3D - 126 195 IPR036638 GO:0046983
Lan17g0663 309 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 130 179 IPR011598 GO:0046983
Lan17g0663 309 PANTHER BHLH TRANSCRIPTION FACTOR 45 308 - -
Lan17g0663 309 Pfam Helix-loop-helix DNA-binding domain 133 180 IPR011598 GO:0046983
Lan17g0663 309 SMART finulus 136 185 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0663 Lan-Chr17 5758546 5761066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0663 130 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 53.552 4.42e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan17g0663 HLH 2.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0663 - - vun:114179595 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0663 17 5758546 5761066 Lan4g0725 4 9551588 9554041 PCT
Lan4g0725 4 9551588 9554041 Lan17g0663 17 5758546 5761066 PCT