Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0654 ATGTTACAGCTTTCTATTCAACGATTGAAGAAGTTCAACTTTCTGATGCCTCAGATATCTGTTTTGGGAAATGCCCATTTCTCAACATCTTCCATTAAGCGTAATCCTATGAGAGTTCCAAATCTTATTGGAGGGAATTTTCTTGACTCAAAATCATCCACTTTCATCGATGTTATAAACCCAGCAACCCAAGAAGTTGTTTCACAAGTTCCCTTGACTACAGATGATGAGTTCAAATCTGCTGTATCTGCAGCCAAGAAGGCATTCACAACATGGCGCAACACTCCAATTACGACACGCCAACGTGTCATGTTGAAGTTTCAGGAGCTTATACGCAGAGATATGGATAAACTTGCTCTGAATGTGACCACGGAACAAGGAAAAACATTAAAGGATGCACAAGGAGATGTATTTCGTGGTTTAGAGGTGGTAGAACATGCTTGTGGGATGGCAACTCTACAAATGGGAGAGTATGTTTCTAATGTATCACATGGAATTGATACTTACAGCATTAGAGAACCACTCGGTGTTTGTGCTGGTATCTGTCCTTTCAACTTTCCGGCAATGATTCCCTTATGGATGTTCCCAATGGCTGTGACCTGTGGTAATACCTTTATTCTAAAGCCATCAGAGAAAGACCCTGGTTGTTCTGTATTGCTTGCAGAATTGGCATTGGAGGCTGGTTTGCCCGAGGGTGTCTTAAATATAGTTCACGGAACTCATGATATTGTGAATGCCATTTGTGATGATGACAACATCAAAGCCATATCTTTTGTTGGTTCAAATGTTGCTGGAATGCACATATATTCAAGAGCAGCAGCTAAAGGGAAACGTGTTCAGTCTAATATGGGGGCAAAAAATCATGCGATTGTCATGCCAGATGCAAATGTTGATGCTACTCTAAATGCTTTAGTTGCGGCTGGTTTTGGTGCTGCTGGACAAAGGTGCATGGCTCTCAGCACAGTTGTTTTTGTTGGAAACTCACAATCATGGGAAAATAAACTTATTGAGCGTGCGAAAGCTCTTAAAATAAATGCTGGAACTGAACCTGATGCAGATCTTGGTCCAGTCATCAGCAAACAGGCAAAAGAGAGAATACACAGATTAGTTCAATCCGGGGTTGAAAGTGGTGCCAGACTACTGCTTGACGGAAGAAATATAGTGGTCCCAGGATATGAATCGGGCAATTTTGTTGGACCAACCATCTTATCAAATGTCACTGCCAACATGGAGTGCTACAAGGAGGAAATTTTTGGCCCAGTTCTTCTTTTCATTGAGGCTGACAGCTTGGAAGAGGCCATAAACATTATCAACAGAAACAAGTATGGAAATGGTGCTTCTATATTTACTACATCCGGTGTTGCTGCTAGGAAATTTCAGACTGAGATTGAAGCTGGGCAGGTCGGCATCAACGTCCCTATTCCAGTTCCTTTGCCCTTTTTCTCATTTACTGGCAACAAGGCATCATTTGCAGGCGACCTCAATTTCTATGGCAAGGCCGGGGTTAACTTTTATACACAGATCAAAACAGTAACCCAGCAATGGAAAGATTCAGCTAGTGAAAGCAAGATTAACATGGCAATGCCAACCTCTCAAAAATCTTCTTAG 1608 0.4185 MLQLSIQRLKKFNFLMPQISVLGNAHFSTSSIKRNPMRVPNLIGGNFLDSKSSTFIDVINPATQEVVSQVPLTTDDEFKSAVSAAKKAFTTWRNTPITTRQRVMLKFQELIRRDMDKLALNVTTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSHGIDTYSIREPLGVCAGICPFNFPAMIPLWMFPMAVTCGNTFILKPSEKDPGCSVLLAELALEAGLPEGVLNIVHGTHDIVNAICDDDNIKAISFVGSNVAGMHIYSRAAAKGKRVQSNMGAKNHAIVMPDANVDATLNALVAAGFGAAGQRCMALSTVVFVGNSQSWENKLIERAKALKINAGTEPDADLGPVISKQAKERIHRLVQSGVESGARLLLDGRNIVVPGYESGNFVGPTILSNVTANMECYKEEIFGPVLLFIEADSLEEAINIINRNKYGNGASIFTTSGVAARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVNFYTQIKTVTQQWKDSASESKINMAMPTSQKSS* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0654 535 PANTHER METHYLMALONATE-SEMIALDEHYDE DEHYDROGENASE 24 534 - -
Lan17g0654 535 SUPERFAMILY ALDH-like 34 516 IPR016161 GO:0016491
Lan17g0654 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 58 492 IPR016162 GO:0016491
Lan17g0654 535 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 284 484 IPR016163 GO:0016620
Lan17g0654 535 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 24 534 IPR010061 GO:0004491
Lan17g0654 535 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 41 515 IPR010061 GO:0004491
Lan17g0654 535 Pfam Aldehyde dehydrogenase family 48 511 IPR015590 GO:0016491
Lan17g0654 535 CDD ALDH_F6_MMSDH 39 515 IPR010061 GO:0004491
Lan17g0654 535 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 309 320 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0654 Lan-Chr17 5659494 5666136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0654 1 499 Aldehyde Dehydrogenase Gene Family AT2G14170 78.728 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0654 K00140 - gmx:100791508 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0654 17 5659494 5666136 Lan18g0623 18 11321085 11326739 LSH