Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0640 ATGAGCTCTCTTCTTCAACCCCATGCTAATGATTGTGAACCAAACAATAGCTCTAAAATTCTACCAACCATTTCAGAATATCATACCACATTTGATGTGGAAGCCATGAAATCGATAAAAACCGGTGAAGCAGATCAAGAGGAAGGTGTTTTCTTGACTTGGGAGGATCTATGGGTGACTGTTTCAAATGGAAAGAATGGAAGGAAACCAATACTTGAAGGTCTAAAAGGGTATGCAAAACCAGGTCAACTCTTGGCTATAATGGGTCCTTCAGGTTGTGGCAAGTCCACATTTCTTGATGCTTTAGCAGGAAGATTAAGTTCAAAGATAAAGCAAACAGGGAAGATTTTAATCAATGGCCACAAACAAGCACTGGCTTATGGAACATCTGCATATGTAACAGAAGATGATACTATTTTGACAACTCTAACAGTTGGAGAAGCTGTATACTACTCAGCTCAGCTCCAATTGCCTGATTCCATGTCCAAGTCCGAGAAAAAGGAGAGAGCAGATTTTACAATCAGAGAAATGGGTCTGCAAGATGCCATTGACACCAGAATCGGAGGGTGCGGATCTAAAGGCATTAGTGGTGGACAAAAGAGGAGAGTCAGCATCTGCATTGAGATCTTAACACGCCCGAAACTCCTCTTCCTAGACGAACCGACTAGTGGACTTGATAGTGCAGCTTCTTATTATGTTATGAGTAGAATTTCCAGCTTGAATGAAAAGGATGGCATTCAAAGGACTATTATAGCATCAATCCACCAGCCAAGTAATGAAGTTTTTCAACTTTTCCACAACCTTTGTCTTCTGTCTTCCGGGAAAACTGTATACTTTGGACCTGTCTCTGCTGCAAATAAGTTTTTCTCATCAAATGGTTTTCCATGCCCAAGTCTTCAGAATCCTTCTGATCACTTTGTAAAAACAGTCAACAAAGACTTCGTACATGACCCTGAGAAAGGATTAGCTGGAGGGCTTAGCACAGAAGAATCAATTCATATTCTCGCAAAATTGTATGATTCATCTGAAATTAATCACCAAGTTGAAAAAGAAATAGCTCAAATAATAGAAAGAGACTCAGTCTCAATGGAGAATGGAAGCCATGCTAACTTTTATACCCAATGCCTCATTCTCACAAGAAGATCTTTCCTTAATATGTATCGCGAAGTTGGCTATTATTGGCTACGCTTACTTATCTATGGTGCCTTGGCTTTAAGTCTTGGAACCATGTTCTTTGACATTGGCTCAAGCAGCGAATCAATTCAGGCCAGAGGTTCTCTGCTTGTGTTTGTTGTTACATTCCTGACCTTCATAACTGTTGGAGGGTTCCCTTCATTTGTGGAGGATATGAAGGTGTTCGAACGAGAAAGACTAAATGGCCATTATGGTGTCACTGCATTTGTCATCGGCAACACCTTATCCGCTATTCCATTCTTGCTATTGATATCATTAATCCCAGGAGCACTGGTATACTACCTAGTTGGACTTCACCAAGGACATGAACAATTTTTGTATTTTACATCTGTGCTTTTTATTTCTGTCTTGTTGGTTGAGGGTCTCATGATGATTGTCACAAGCATGGTTCCAAATTTCCTGATGGGCATAATCTTCGGTTCCGGAATCTTAGGAGTAATGATGTTAGATGGTGGGTTCTATAGGTTGCCAAGTGATATTCCTAAGCCATTTTGGAGATACCCTTTGCACTACATTTCCTTCCACAAATATGCATACCAAGGATTGTTCAAGAATGAGTTCCAAGGTCTAAAATTCACTAGTAATCAACTTGGAGGGCCTGCAAACTTTAGTGGTGAAGAAATACTGAGACACTTATGGCAAGTGGACATTAATTATTCAAAGTGGTTGGACCTTGCTATCTTGGCTGGAATGGCTATAGTATATAGGATTCTGTTCTTGGTTATCATTAAGAGCTTTGAGAAGATGAAACCTATTGTCTCAGCTATTAATTGTCCCCAACCAAATTTTAGGTTCACTAAAGTGACTAGAAGCAATGAGATTGAATAG 2022 0.3986 MSSLLQPHANDCEPNNSSKILPTISEYHTTFDVEAMKSIKTGEADQEEGVFLTWEDLWVTVSNGKNGRKPILEGLKGYAKPGQLLAIMGPSGCGKSTFLDALAGRLSSKIKQTGKILINGHKQALAYGTSAYVTEDDTILTTLTVGEAVYYSAQLQLPDSMSKSEKKERADFTIREMGLQDAIDTRIGGCGSKGISGGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMSRISSLNEKDGIQRTIIASIHQPSNEVFQLFHNLCLLSSGKTVYFGPVSAANKFFSSNGFPCPSLQNPSDHFVKTVNKDFVHDPEKGLAGGLSTEESIHILAKLYDSSEINHQVEKEIAQIIERDSVSMENGSHANFYTQCLILTRRSFLNMYREVGYYWLRLLIYGALALSLGTMFFDIGSSSESIQARGSLLVFVVTFLTFITVGGFPSFVEDMKVFERERLNGHYGVTAFVIGNTLSAIPFLLLISLIPGALVYYLVGLHQGHEQFLYFTSVLFISVLLVEGLMMIVTSMVPNFLMGIIFGSGILGVMMLDGGFYRLPSDIPKPFWRYPLHYISFHKYAYQGLFKNEFQGLKFTSNQLGGPANFSGEEILRHLWQVDINYSKWLDLAILAGMAIVYRILFLVIIKSFEKMKPIVSAINCPQPNFRFTKVTRSNEIE* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0640 673 Pfam ABC-2 type transporter 373 585 IPR013525 GO:0016020|GO:0140359
Lan17g0640 673 Gene3D - 52 313 IPR027417 -
Lan17g0640 673 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524
Lan17g0640 673 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 287 IPR027417 -
Lan17g0640 673 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 30 664 - -
Lan17g0640 673 Pfam ABC transporter 75 223 IPR003439 GO:0005524
Lan17g0640 673 Pfam ABC-2 type transporter 255 310 IPR043926 GO:0140359
Lan17g0640 673 PANTHER XENOBIOTIC-TRANSPORTING ATPASE-RELATED 30 664 - -
Lan17g0640 673 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 52 298 IPR003439 GO:0005524
Lan17g0640 673 SMART AAA_5 81 270 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0640 Lan-Chr17 5551763 5555313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0640 71 280 Calmodulin-binding Proteins AT2G36910 26.047 5.04e-09 57.8