Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0639 ATGGCCTCCATTCATCCCTCTATTCCATTACGTCCCACTGTTTATGGAACTAAACCTACCTCAAGATCAGTGATACAACAAAGTGTCATAGAGATTGAAACCACCTCACTAGAGATAGAACCTTCAGTTAGGAGTACCCAGACAAAAGAGATGGGTATCTGTTTGACATGGAAGGATCTATATGTGACTGCTTCAGTGGGAAGGAATGGAAGAAGACCAATTCTTCAGGGCCTAACTGGTTATGCCAAACCAGGACAGCTTTTAGCTATAATGGGTCCTTCTGGTTGCGGAAAATCCACACTTCTTGATGCTCTAGCAGGGAGATTAGGATCAAACACAAGACAAACTGGGGAGATTCTGATCAATGGTCACAAACAAGCACTAGCTTATGGAACCTCGGCTTATGTTACACAAGATGATACATTATTGACATCCTTAACGGTTAGAGAAGCAGTGCACTATTCAGCTCAACTCCAGTTACCTGCTTCAATGTCCAAGGGAGAGAAAAAAGAAAGAGCAGATTTCATAATAAGAGAAATGGGTTTGCAAGAAACCATTAACACAAGAATTGGAGGGTGGGGATGTAAAGGCATTAGTGGTGGACAAAAGAGGAGAGTGAGCATTTGTATTGAGATACTTACACAGCCTAAACTTCTCTTCCTTGATGAACCAACTAGTGGACTTGATAGTGCAGCATCTTATTATGTCATGAGATCAATTGCAACCCTACAAAAAAAAGATAACATTCAGAGGACAGTTATTGCTTCAATTCACCAACCTAGTACTGAAGTTTTTCAACTTTTCAGTAACCTTTGTCTTCTATCTTCTGGTACAGTAGTATACTTTGGACCAGCTTCTGCTGCAAGTGAGTTTTTCACTTCAAGTGGTTTTCCATGTCCTCCTCTCCAAAATCCATCAGATCATTTATTGAAAGTTATAAACAAGGATTTTGATCAGGGCACCGACTTGGATATGAATGGAACTATAACAATACCGGCAGAAGAAGCAATTCGTATCCTTGTGGAGTCTTATAAATTATCTGAAAGGAACCATGAAGTTCAGAAAGAAGTAGTTATATTATCTGAGAAGGATAGGGGCTCACTTCTTTCCTTTGTGTCTACTTTCATAACTTTCATGGCCATTGGTGGGTTCCCTTCCTTTGTTGAGGACATGAAGGTATTTGAACGAGAAAGGCTAAATGGTCATTATGGTGTAACTGCATTCGTCATTGGGAACACTTTTTCTTCTATCCCATACTTAGTACTGAATTCACTGATTCCTGGAGCTATCACTTATTACCCTCCCGGTCTTCAAAAAGGATATGAACACTTTCTATACTTCATTTGTGTTTTATTTTCTTGTTTGATGTTAGTAGAGAGTCTTATGATGATAATTGCTAGCATTGTTCCAAACTATCTAATGGGTATAATAACTGGTGCTGGAATTCAAGGACTTATGATCTTAGTTGGTGGGTTCTTTAAATTGCCAAATGAACTTCCTAAGTCATTTTGGAGATACCCAATACACTATGTTGCCTTCCACAGGTATGCATTCCAAGGATTGTTCAAGAATGAGTATGAAGGACTCAAATTTAATGCAGGTAAAGTTGGAGGAGGCTTAAACAAAAACATTAGTGGTGAAGAGGTTCTAAGAGATACATGGGAAGTTGATATGAGTTACTCAAAGTGGGTCGATCTTGCAATCTTATTAGGGATGATTGTTCTATATCGAGTTATATTTTTGGTTATCCTTAAGACTACTGAGAAGGTTAAGTTCATTATGGCTTGTAATGTGAAGTCCACCTAA 1806 0.3876 MASIHPSIPLRPTVYGTKPTSRSVIQQSVIEIETTSLEIEPSVRSTQTKEMGICLTWKDLYVTASVGRNGRRPILQGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSNTRQTGEILINGHKQALAYGTSAYVTQDDTLLTSLTVREAVHYSAQLQLPASMSKGEKKERADFIIREMGLQETINTRIGGWGCKGISGGQKRRVSICIEILTQPKLLFLDEPTSGLDSAASYYVMRSIATLQKKDNIQRTVIASIHQPSTEVFQLFSNLCLLSSGTVVYFGPASAASEFFTSSGFPCPPLQNPSDHLLKVINKDFDQGTDLDMNGTITIPAEEAIRILVESYKLSERNHEVQKEVVILSEKDRGSLLSFVSTFITFMAIGGFPSFVEDMKVFERERLNGHYGVTAFVIGNTFSSIPYLVLNSLIPGAITYYPPGLQKGYEHFLYFICVLFSCLMLVESLMMIIASIVPNYLMGIITGAGIQGLMILVGGFFKLPNELPKSFWRYPIHYVAFHRYAFQGLFKNEYEGLKFNAGKVGGGLNKNISGEEVLRDTWEVDMSYSKWVDLAILLGMIVLYRVIFLVILKTTEKVKFIMACNVKST* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0639 601 Gene3D - 43 295 IPR027417 -
Lan17g0639 601 SMART AAA_5 84 278 IPR003593 -
Lan17g0639 601 Pfam ABC-2 type transporter 258 318 IPR043926 GO:0140359
Lan17g0639 601 Pfam ABC-2 type transporter 365 526 IPR013525 GO:0016020|GO:0140359
Lan17g0639 601 ProSitePatterns ABC transporters family signature. 198 212 IPR017871 GO:0005524
Lan17g0639 601 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 291 IPR027417 -
Lan17g0639 601 Pfam ABC transporter 76 226 IPR003439 GO:0005524
Lan17g0639 601 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 301 IPR003439 GO:0005524
Lan17g0639 601 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 362 597 - -
Lan17g0639 601 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 22 363 - -
Lan17g0639 601 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 22 363 - -
Lan17g0639 601 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 362 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0639 Lan-Chr17 5543932 5550788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0639 72 262 Calmodulin-binding Proteins AT2G36910 29.146 3.09e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0639 K05681 - gmx:100813462 825.469