Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0637 ATGGATAATCTCTGTTGTTTCAACTCTCTCAGTCAGGTGGTTGGAGGGCGTTCTTCATTTAACTCTGGCAAGGGAAAGAGCCATCAGTCCCCAGCTAAGTATGGTTTTACCCTAGTTAAAGGGAAAGCAAGCCACCCAATGGAGGACTATCATGTAGCAAAATTTGTCCAGAGCAAAGGGCACGAGCTTGGACTCTTCGCTATATACGACGGACACCTGGGAGATAACGTACCAGCCTATTTACAAAAGCATCTCTTTTCTAATATCTTGAATGAAGTGGACTTCTGGGATGACCCATTCTTGTCCATCTATAAAGCTTATGAGTCAACAGATCAGGCAATTCTTTCTCACAGTCCGGATTTGGGGCGAGGAGGATCGACTGCAGTTACTGCGATTCTCATAAATAATCAGAAATTATGGGTAGCCAATGTTGGAGATTCACGAGCAGTTCTGTCAAGGGGAGGGGTGGCTGTACCGATGACTACTGATCATGAACCGAATACTGAGCGGGACAGCATTGAGAACAGAGGTGGCTTTGTCTCGAACATGCCAGGAGATGTTGCAAGAGTGAATGGGCAACTAGCAGTTTCTCGTGCATTCGGAGACAAAAACCTCAAAATACACTTGCGATCTGATCCTGACATTCAGTTTGAGAATATTACCCCAGATATTGAGCTTTTGATAATTGCTAGTGATGGTCTATGGAAGGTAATGGCAAATCAAGAGGCTGTTGATATTGCAATAAGGACAAAGGATCCACAGAAGGCAGCAAAACAACTAGCTGTTGAAGCATTGAACAGAGAAAGTAAAGATGATATTTCCTGCATTGTCGTTCGTTTCAAGGTATAG 849 0.4382 MDNLCCFNSLSQVVGGRSSFNSGKGKSHQSPAKYGFTLVKGKASHPMEDYHVAKFVQSKGHELGLFAIYDGHLGDNVPAYLQKHLFSNILNEVDFWDDPFLSIYKAYESTDQAILSHSPDLGRGGSTAVTAILINNQKLWVANVGDSRAVLSRGGVAVPMTTDHEPNTERDSIENRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKIHLRSDPDIQFENITPDIELLIIASDGLWKVMANQEAVDIAIRTKDPQKAAKQLAVEALNRESKDDISCIVVRFKV* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0637 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Lan17g0637 282 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 281 - -
Lan17g0637 282 Gene3D - 28 282 IPR036457 -
Lan17g0637 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Lan17g0637 282 SMART PP2C_4 29 278 IPR001932 -
Lan17g0637 282 CDD PP2Cc 33 280 IPR001932 -
Lan17g0637 282 SUPERFAMILY PP2C-like 30 281 IPR036457 -
Lan17g0637 282 SMART PP2C_SIG_2 44 280 IPR001932 -
Lan17g0637 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0637 Lan-Chr17 5506279 5511745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0637 1 281 PP2C-type Phosphatase Gene Family AT1G22280 70.383 1.35e-144 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0637 K17506 - gmx:100801722 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0637 17 5506279 5511745 Lan4g0747 4 9659214 9663697 PCT
Lan17g0637 17 5506279 5511745 Lan19g1038 19 17613767 17618079 PCT
Lan4g0747 4 9659214 9663697 Lan17g0637 17 5506279 5511745 PCT
Lan19g1038 19 17613767 17618079 Lan17g0637 17 5506279 5511745 PCT