Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0632 ATGGCCAAAAATGAGTTGAAACTTTTGGGTGGTTGGTTCAGTCCATTTGCTCTGAGGGTTGAGATTGCACTTAACATAAAATCTTTGAATTATGAGAATATTGAAGAAACCTTGAATCCCAAAAGTGACCTGCTTCTTCAGTCCAACCCTGTGTACAAGAAAATCCCAGTTCTCATCCATGGAGATAAACCCATTTCTGAATCTGGAATCATAGTTCAGTATATTGATGAGGTTTGGACTAATGCTCCTTCAATCCTTCCTACAAATGCTTATGATCGAGCCAATACTCGCTTTTGGGCTTCTTACATCGATGATAAGTTGTTTCCATCCTTGAGAAACATTCTAGCTGCTGAAGATGAAGAAGCAAAGAAAACAAACTTCATTCAAGTGGAAGAAGTGCTTGAAAGGATGGAAGAAGTGTTCAACAAACACAGTGAAGGAAAGGCCTATTTTGGAGGAGATAAAATTGGATTCATTGATATTGCTTTTGGGAGCACGTTGAGGTGGTTGAGTGTGATAGAGAATATGAGTGGGAAAAAAGTGCTTGTTGAAGCAAAGACTCCTTCTTTGGTCAAATGGGCTGAGACCTTTGCAGCTGATCCTGCAGTCAAGGGAGTTTTTCCAGAGACTGATAAGCTTATTGAGTTTGCAAAGGTTCTTCAGCAAAGATGGGCTTCTGCTGCTGCAGCAGCAGCAAAGTAA 702 0.4046 MAKNELKLLGGWFSPFALRVEIALNIKSLNYENIEETLNPKSDLLLQSNPVYKKIPVLIHGDKPISESGIIVQYIDEVWTNAPSILPTNAYDRANTRFWASYIDDKLFPSLRNILAAEDEEAKKTNFIQVEEVLERMEEVFNKHSEGKAYFGGDKIGFIDIAFGSTLRWLSVIENMSGKKVLVEAKTPSLVKWAETFAADPAVKGVFPETDKLIEFAKVLQQRWASAAAAAAK* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0632 233 SFLD Main.3: Omega- and Tau-like 2 228 IPR045073 -
Lan17g0632 233 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 219 IPR045073 -
Lan17g0632 233 Pfam Glutathione S-transferase, C-terminal domain 98 201 IPR004046 -
Lan17g0632 233 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Lan17g0632 233 SFLD Main (cytGST) 2 228 - -
Lan17g0632 233 Gene3D Glutaredoxin 1 85 - -
Lan17g0632 233 Gene3D - 86 229 - -
Lan17g0632 233 CDD GST_C_Tau 90 220 IPR045074 GO:0004364|GO:0006749
Lan17g0632 233 SUPERFAMILY Thioredoxin-like 5 108 IPR036249 -
Lan17g0632 233 CDD GST_N_Tau 6 79 - -
Lan17g0632 233 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Lan17g0632 233 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 220 IPR010987 -
Lan17g0632 233 SUPERFAMILY GST C-terminal domain-like 77 223 IPR036282 -
Lan17g0632 233 PANTHER GLUTATHIONE S-TRANSFERASE U17 5 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0632 Lan-Chr17 5469688 5470913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0632 1 220 Glutathione S-transferase Gene Family AT1G10360 55.656 1.57e-85 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0632 K00799 - gmx:547576 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0632 17 5469688 5470913 Lan6g0639 6 5670802 5671874 LSH