Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0628 ATGAGTGAGTCCGTTCCTTCTACTCGGACGGTTCGACTCGGCCGAGTCAAGCCTCAAGCCCCTGGCCACCGCACCATCTTCTGCAACGACCGCGAGGCTAACCTTCCCGTTCGCTTCAAGGGGAACTCAATATCAACTACAAAATACAACTTTTTCACTTTTTTCCCTAAAGGATTGTTTGAACAGTTCAGGCGGGTTGCAAATCTCTACTTCCTTACCATCTCAATATTGTCTACCACACCAATCAGCCCTGTGTCTCCAATAACTAATGTGCTTCCTCTATCCGTGGTGCTTCTCCTCTCACTTATTAAGGAAGCTTTTGAGGATTGGAAGCGTTTTCAAAATGACATGGTCATAAACAATAATACCATAGATGTTTTGCAAGATGAAAAGTGGGTGTCTATACCCTGGAAAAAGTTGCAAGTTGGCGATATTGTGAAGGTTAAGCAAGATGGATTCTTTCCTGCAGATCTGCTTTTCCTGGCTAGTACAAATGTAGACTGTGTCTGCTACATTGAGACTGCGAATTTGGATGGGGAAACCAACTTGAAGATTAGGAAAGCATTGGAGAAGACTTGGGATTACCTGATTCCAGAGAAGGCATCCGAGTTCAAAGGCGAAGTTCAGTGTGAACAACCAAACAATTCATTATATACCTTCACTGGAAATCTGATAATTCAAAACCAAACACTGCCTATCACTCCAAACCAACTTCTGTTGCGAGGATGCAGTCTCAGGAATACAGAGTATATTGTTGGGGTTGTGATTTTTACTGGACATGAAACAAAGGTGATGATGAATGCTATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAGCTTGACAAGCTCATACTAATTTTATTTGCGACTCTCTTTATGATGTGTTTTATCGGAGCCGTAGGCAGTGCTATCTTCGTAAACAATAAGTATTTCTACTTACGTCTTGAATCATCAGAGGAGGGCTCAGCCCAGTTTGACCCAAGAAACAGATTTTTGGTTTTCCTTCTGACTATGTTTACCCTCATCACTTTGTACTCAACAATTATCCCCATTTCACTTTATGTGTCAATAGAGATGATAAAATTTATTCAGTCCACTCAGTTTATCAACAAGGACTTGAACATGTACCATAAGGAAACAAATACCCCAGCGTTGGCCAGAACATCAAATCTGAATGAAGAACTTGGACAGGTGGAATACGTCTTCTCTGACAAAACTGGTACTTTGACAAGAAACTTGATGGAGTTCTTCAAGTGTTCAATTGGAGGAGAGATATATGGAAATGGCTTGACTGAAACTGAGAAGGGGTTGGCAGAGCGTAATGGTGTAAAACTTGAGGAAAATATCACAACCAATGCAGTAAGAGAGAGGGGTTTTAATTTTAATGATGCTAGGCTTATGAGTGGAGCTTGGAGGAATGAGCCGAATCCTGATAGCTGCAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTGCTTCCCGAGGGTGATGAATCCCCTGAGAAGATCAGATATCAAGCTGCATCACCTGATGAATCTGCTTTGGTTATTGCGGCAAAGAACTTCGGTTTTTTCTTTTACAGACGCACACCTACGACGATATATGTTCGTGAATCTCATGTTGAGAAGATGGGTAAAATTCAAGATGTGTCATATGAGATTTTGAATGTGCTCGAGTTTAACAGTACAAGGAAGCGCCAGTCTGTTGTATGTCGTTATCCAGATGGAAGGCTTGTATTGTACTGTAAGGGTGCTGATACTGTAATCTTCGAGAGATTAGCTGATGATTACAATAGTATAAAAAAAGTGACTAGGGAGCATTTGGAACAATTTGGATGTGCTGGACTACGTACATTATGCCTTGCCTACAAAGATTTACACCCTGATGTTTATGAAAGCTGGAATGAAAAGTTCATCAATGCCAAATCTTCTCTACATGATCGTGAAAAGAAGTTAGATGAGGTGGCTGAACTTATAGAAAATGATCTCATTTTGATTGGTAGCACTGCCATAGAAGACAAGCTTCAAGAGGGAGTACCAGCTTGTATAGAGACTCTTCAAAGAGCTGGCATTAAAATTTGGGTGCTTACAGGGGACAAGATTGAAACAGCAATAAATATTGCCTATGCATGCAATCTAATAAACAATGAGATGAAGCAATTTATTATCAGTTCAGAAACTGATGCAATTAGAGAGGTTGAAGACAGGGGGGACCAAGTAGAAATTGCACGATTTATTAAAGAAGAAGTGAAAAGAGAGCTCAAGAAGTGCCTCGAGGAAGCACAGAGCTATGTTAGCTCTATATCTAAACCAAAATTAGCACTTGTAATTGATGGTAAATGTTTAATGTATGCACTGGATCCAAGTTTGAGAGTCATGCTGCTGAAATTCAGTTTGAGTTGCCATGCTGTTGTTTGCTGTCGGGTTTCTCCTTTACAGAAAGCTCAGGTCACAAGTTTGGTCAGGAAAGGTGCAAAGAAAATAACACTTAGTATTGGCGATGGAGCTAATGATGTCAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATAAGTGGGTTGGAGGGGATGCAAGCTGTGATGGCTAGTGATTTTGCCATTGCACAGTTCCGTTACCTTGCAGATTTGCTTCTTGTTCATGGCCGGTGGTCATATTTTCGAATATGCAAGGTGGTGTTATACTTCTTTTACAAGAATCTCACATTTACTCTTACTCAGTTTTGGTTTACTTTTCAAACTGGGTTTTCTGGCCAGAGATTCTATGATGATTGGTTTCAGTCATTGTATAATGTTATCTTCACTGCACTGCCTGTGGTTATTGTTGGACTATTTGACAAGGATGTCAGTGCATCTCTATCGAAGAAGTATCCTGAATTATACATGGAGGGAATAAGAAATGTCTTTTTCAAATGGAGAGTTGTGGCTATATGGGCCTTTTTTTCTGTCTACCAATCTCTGATATTGTTTTATTTTGCGAGTACATCAAGTTTAACTGCCAAAAATTCAGCAGGAAAGATATTTGGGCACTGGGATGTCAGTACAATGGCCTTCACATGTATTGTATTAACCGTTAACTTGCGTCTTCTTATGATATGCAATTCAATCACAAGATGGCATTATTATAGTGTTGGTGGAAGTATATTAGCATGGTTTATTTTTGTTTTTATATATACGGGGATCAGCACTCCTTATGATCGACAGGAGAACTTATATTTTGTCATATATATCTTGCTCAGTACATTATATTTCTACCTTACATTGCTACTGGTTCCGGTTGCTGCACTTTTCTGCGACTTTGTTTACCAAGGGGTTCAGAGATGGTTCTTCCCTTATGATTATCAGATTATTCAAGAAATGCATAGACAAGAGTACGACGACACTGGCAGGGAGCAACTGATAGAGATGGGGGGCATTCTTAGCCCAGCTGAGGCGAAGAGCCATGGCGTATCTCAGTTGCCACAAGAGATATCAAAACATACCGGGTTTGCTTTTGATTCACCTGGTTATGAGTCATTTTTTGCTGCACAGCTTGGTATTTATGCCCCACAAAAAGCATGGGATGTTGCAAGACGAGCAAGCATGAAACCTCGGCTAAAGATTGGACAGAAAAAGTAG 3624 0.4042 MSESVPSTRTVRLGRVKPQAPGHRTIFCNDREANLPVRFKGNSISTTKYNFFTFFPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVLPLSVVLLLSLIKEAFEDWKRFQNDMVINNNTIDVLQDEKWVSIPWKKLQVGDIVKVKQDGFFPADLLFLASTNVDCVCYIETANLDGETNLKIRKALEKTWDYLIPEKASEFKGEVQCEQPNNSLYTFTGNLIIQNQTLPITPNQLLLRGCSLRNTEYIVGVVIFTGHETKVMMNAMNVPSKRSTLERKLDKLILILFATLFMMCFIGAVGSAIFVNNKYFYLRLESSEEGSAQFDPRNRFLVFLLTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLNMYHKETNTPALARTSNLNEELGQVEYVFSDKTGTLTRNLMEFFKCSIGGEIYGNGLTETEKGLAERNGVKLEENITTNAVRERGFNFNDARLMSGAWRNEPNPDSCKEFFRCLAICHTVLPEGDESPEKIRYQAASPDESALVIAAKNFGFFFYRRTPTTIYVRESHVEKMGKIQDVSYEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIFERLADDYNSIKKVTREHLEQFGCAGLRTLCLAYKDLHPDVYESWNEKFINAKSSLHDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPACIETLQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFIISSETDAIREVEDRGDQVEIARFIKEEVKRELKKCLEEAQSYVSSISKPKLALVIDGKCLMYALDPSLRVMLLKFSLSCHAVVCCRVSPLQKAQVTSLVRKGAKKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLADLLLVHGRWSYFRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVVIVGLFDKDVSASLSKKYPELYMEGIRNVFFKWRVVAIWAFFSVYQSLILFYFASTSSLTAKNSAGKIFGHWDVSTMAFTCIVLTVNLRLLMICNSITRWHYYSVGGSILAWFIFVFIYTGISTPYDRQENLYFVIYILLSTLYFYLTLLLVPVAALFCDFVYQGVQRWFFPYDYQIIQEMHRQEYDDTGREQLIEMGGILSPAEAKSHGVSQLPQEISKHTGFAFDSPGYESFFAAQLGIYAPQKAWDVARRASMKPRLKIGQKK* 1208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0628 1207 CDD P-type_ATPase_APLT_Dnf-like 41 995 - -
Lan17g0628 1207 SFLD Haloacid Dehalogenase 386 886 - -
Lan17g0628 1207 SUPERFAMILY Calcium ATPase, transduction domain A 121 265 IPR008250 -
Lan17g0628 1207 Gene3D - 104 269 - -
Lan17g0628 1207 PRINTS P-type cation-transporting ATPase superfamily signature 404 418 - -
Lan17g0628 1207 PRINTS P-type cation-transporting ATPase superfamily signature 835 854 - -
Lan17g0628 1207 Pfam E1-E2 ATPase 121 360 - -
Lan17g0628 1207 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 39 1121 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lan17g0628 1207 Pfam Phospholipid-translocating ATPase N-terminal 26 90 IPR032631 -
Lan17g0628 1207 Pfam Cation transport ATPase (P-type) 501 595 - -
Lan17g0628 1207 Pfam Phospholipid-translocating P-type ATPase C-terminal 863 1113 IPR032630 -
Lan17g0628 1207 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 808 914 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan17g0628 1207 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 8 1201 - -
Lan17g0628 1207 SUPERFAMILY Calcium ATPase, transmembrane domain M 38 1113 IPR023298 -
Lan17g0628 1207 SUPERFAMILY HAD-like 399 891 IPR036412 -
Lan17g0628 1207 ProSitePatterns E1-E2 ATPases phosphorylation site. 406 412 IPR018303 -
Lan17g0628 1207 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 8 1201 - -
Lan17g0628 1207 SFLD p-type atpase 386 886 IPR044492 -
Lan17g0628 1207 Gene3D - 668 875 IPR023214 -
Lan17g0628 1207 Gene3D - 532 667 IPR023299 GO:0000166
Lan17g0628 1207 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 411 673 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0628 Lan-Chr17 5387244 5402712 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0628 8 1206 Primary Pumps ATPases AT1G59820 78.250 0.0 2021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0628 K14802 - gmx:100815547 2177.52