Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0605 ATGGCATCAAGATCGTTTGCTAATCTCCTAGATTTACTTGGAGATTTGCCGGATATTCCTCACACCCCAAGAACACTTCCAAGGGTTATGACAGCTCCTGGAATTATTTCTGACCTAGATGTTTATGGTAGAAATGATGTGGGCTCAGATGTTAGCTCTTCTGGTTCTGGGTGTCGAGAACGGAAAATCATAGTAGCGAACATGTTGCCGTTGAAGGCTAAAAGAGATATAGACACTGGTAAATGGTGCTTCAGTTTGGACGAGGATTCGATTTTATTGCAATTAAAAGATGGGTTTTCTTTTGACAGTGAGGTGATCTATGTGGGGTCCCTCAAAGTTGAAATAGACGCCGGTGAGCAGGACGAAGTTGCTAAGAAATTACTGGAGGACTTCAATTGTGTGCCTACCTTTCTGCCCCATGACCTCCAGAAAAAATTCTATCTTGGATTTTGTAAGCAGCAGCTCTGGCCTCTCTTCCATTACATGCTACCTATGTGCCCTGATCATGGTGACCGGTTTGACCGCTCGCTATGGCAGGCTTATGTTTCTGCAAACAAAATATTTGCAGACATGGTTATGGAAATAATCAATCCCGATGATGATTTTGTTTGGGTTCATGACTATCACTTGATGGTATTGCCTACATTCTTGAGGAAGCGGTTTAATCGAGTTAAACTTGGATTCTTTCTTCACAGTCCTTTCCCTTCATCTGAAATTTACCGAACTTTGCCAGTAAGGGATGAAATTCTGAAGGGTTTATTGAATTCTGATTTAATAGGGTTTCATACATTTGATTATGCTCGCCACTTCCTCTCTTGTTGCAGCAGAATGCTAGGTCTGGACTATGAATCTAAACGAGGACATATAGGACTTGATTATTTCGGCCGTACTGTATTTATCAAAATTTTGCCTGTAGGCATTCACATGGGTAGGCTTGAATCTGTGTTAAATCTTCCTTCTACATCTGCTAAAGTTAAAGAGATTCAGGAAGAGTTTAAGGGTAGGAAGGTGATTCTTGGTGTTGATGACATGGATATTTTTAAAGGCATCAGTCTAAAGCTTCTAGCTGTGGAGCATTTGCTGCAGCAGAATCCAAATTTGCAGGGCAAAGTTGTCCTAATTCAAATTGTGAACCCTGCAAGGGGTTCAGGGAAGGATGTTCAGGAAGCAAAGAGGGAAACATATTTAATTGCCCAGAGGATCAACGATATTTATGGTACAAACCATTACAGGCCAGTTATTCTCATTGACCGTCCTGTTCCTCGTTTTGAGAAGAGTGCCTATTATGCTGTAGCAGAATGTTGCATTGTCAATGCTGTAAGGGATGGTATGAACTTAGTCCCATACAAATATATTGTTTGTAGGCAAGGAACTGCACAAATGGATAAAGCACTAGGAAGAACAAGTGATTCTCCTCGTACGGGCATGCTTGTTGTATCAGAGTTCATTGGTTGTTCTCCTTCTCTAAGTGGGGCAATCAGGGTCAATCCCTGGGATGTAGATGCTGTGGCTGATGCACTGTATTCAGCTATCACAATGAGTGATTCAGAGAAGCAATTGAGGCATGAAAAACACTTCCGATACGTCAGCTCTCATGATGTGGCGTATTGGGCTCACAGCTTTATGCAAGATTTGGAGAGAGCATGCAAAGATCATTACACCAAAAGGTGCTGGGGAATTGGTTTGGGCCTAGGGTTTAGAGTTGTTTCACTTTCTCCTGGTTTTAGGAAGTTGTCCATGGACCACATTGTTTCAGCATACAAAAGAACCAATAGAAGGGCCATATTTCTTGATTATGATGGTACTGTCGTACCACAATCTTCTATAAATAATATCCCCAGCCCTGAAGTGATATCTGTGCTAAATGCTCTGTGTAATGATACCAAAAATACTGTTTTTCTTGTTAGTGGAAGGGGAAGAGATTCTCTTAGTGATTGGTTTTCTTCATGCAAAAGGATGGGGCTTGTGGCTGAACATGGATACTTTTTAAGGTGGAGTGAAGATTCTGAATGGGAAACAACTCAGGTCTCTGCTGACCTTGATTGGAAAAACATAGTGGAACCTATCATGCAATTGTACACAGAAACAACTGATGGTTCCAATATGGAAATTAAGGAAAGTGCATTGGTGTGGCGTCATCAAGATGCAGACCCTGATTTTGGCAAGAGCCAAGCCAAAGAGTTGTTGAATCACTTGGAAAGCGTGCTTGCCAATGAACCCGCGGTTGCTAAGAAGGGCCAGCATATTGTTGAAGTTAATCCTCAGGGAATAAGTAAGGGTTTGGTTGCTGAAAAAGTTCTTTCGACTATGGTTAATGGCGGCAATCTACCAGATTTTGTAATGTGCATTGGAGATGATATTTCTGATGAAGACATGTTTGAGAGCATATTAAGGACTGTCTCATGTCCATCATTACCAATAGCCCCTGAAATATTTGCCTGCACTGTTGGCCAGAAGCCTAGCAAAGCCAAATATTATCTTGATGATCCTTCTGATGTCTTAAAGTTGCTTCAATGTCTTGGTGCTTCTTCTAACCCAAAACCCAGACATCTAGCCCAATTCCAAGTTTCTTTTGAGAGCAGAGTTTGA 2589 0.4152 MASRSFANLLDLLGDLPDIPHTPRTLPRVMTAPGIISDLDVYGRNDVGSDVSSSGSGCRERKIIVANMLPLKAKRDIDTGKWCFSLDEDSILLQLKDGFSFDSEVIYVGSLKVEIDAGEQDEVAKKLLEDFNCVPTFLPHDLQKKFYLGFCKQQLWPLFHYMLPMCPDHGDRFDRSLWQAYVSANKIFADMVMEIINPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDEILKGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIKILPVGIHMGRLESVLNLPSTSAKVKEIQEEFKGRKVILGVDDMDIFKGISLKLLAVEHLLQQNPNLQGKVVLIQIVNPARGSGKDVQEAKRETYLIAQRINDIYGTNHYRPVILIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTAQMDKALGRTSDSPRTGMLVVSEFIGCSPSLSGAIRVNPWDVDAVADALYSAITMSDSEKQLRHEKHFRYVSSHDVAYWAHSFMQDLERACKDHYTKRCWGIGLGLGFRVVSLSPGFRKLSMDHIVSAYKRTNRRAIFLDYDGTVVPQSSINNIPSPEVISVLNALCNDTKNTVFLVSGRGRDSLSDWFSSCKRMGLVAEHGYFLRWSEDSEWETTQVSADLDWKNIVEPIMQLYTETTDGSNMEIKESALVWRHQDADPDFGKSQAKELLNHLESVLANEPAVAKKGQHIVEVNPQGISKGLVAEKVLSTMVNGGNLPDFVMCIGDDISDEDMFESILRTVSCPSLPIAPEIFACTVGQKPSKAKYYLDDPSDVLKLLQCLGASSNPKPRHLAQFQVSFESRV* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0605 862 Gene3D - 595 827 IPR023214 -
Lan17g0605 862 Gene3D Glycogen Phosphorylase B; 314 530 - -
Lan17g0605 862 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 1 853 - -
Lan17g0605 862 Pfam Glycosyltransferase family 20 61 546 IPR001830 GO:0003824|GO:0005992
Lan17g0605 862 SUPERFAMILY HAD-like 593 841 IPR036412 -
Lan17g0605 862 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 550 - -
Lan17g0605 862 CDD GT20_TPS 61 546 IPR001830 GO:0003824|GO:0005992
Lan17g0605 862 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 594 795 IPR006379 -
Lan17g0605 862 Pfam Trehalose-phosphatase 596 831 IPR003337 GO:0003824|GO:0005992
Lan17g0605 862 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 853 IPR001830 GO:0003824|GO:0005992
Lan17g0605 862 TIGRFAM T6PP: trehalose-phosphatase 591 840 IPR003337 GO:0003824|GO:0005992
Lan17g0605 862 CDD HAD_TPP 594 835 - -
Lan17g0605 862 Gene3D - 676 755 - -
Lan17g0605 862 Gene3D Glycogen Phosphorylase B; 56 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0605 Lan-Chr17 5083714 5089073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0605 1 862 Trehalose Biosynthesis Gene Families AT1G60140 72.885 0.0 1342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0605 K16055 - gmx:100818536 1546.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0605 17 5083714 5089073 Lan18g0012 18 106188 111038 LSH