Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0604 ATGGAAAATGGTGGGATTGAAGAGTGCAGTGTGAAGTTGTTGGATAGTTTTTGCAATTATGGGAGCAGTGAGTCAAGGTGGGTTGATGGCAGTGAAGTTGATTCAATGGAGCATGAGCCTCCTCCATCACGGTCTAATGAAGGTAGAGAAGGATATGACTCACTCAGGAGGAGGCTTGTGAAGAAGCCCAAGAGGGTTGATTCATTTGATGTTGAAGCCATGGAGATTTCTAGAACTCAGGACCACCACTCCAAGGATGCTTCCCTTTTGCCTACTCTTGCATTAGCATTTCAGACTCTTGGTGTGGTATATGGTGACATGGGAACAAGTCCTCTCTATGTTTTCGCTGATGTCTTCAGTAAGGTTCCAATTGAATCAGATGTTGATATCTTGGGGGCATTATCATTGGTGATGTACACAATAACACTTATTCCATTAGCAAAGTATGTTTTTATAGTCCTCAAAGCAAATGACAATGGAGAAGGAGGAACGTTTGCACTATACTCCTTGATTTGCCGATTCGCAAATGTGGGTCTGCTTCCAAATCGTCAACAAGCTGATGAGCATATCTCTAGTTTTAGGCTTAAAGTCCCCAGTTTAGAGATGAAAAGGGCTTTAAAAATAAAGGACACTTTGGAAAAGAATAAGTCTTTGAAAACACTTTTGTTGCTGTTGGTTCTGCTGGGAACTTCCATGGTTATTGGAGATGGTATTCTAACCCCAGCAATGTCAGTGCTATCTGCTGTAAGTGGGCTTCAGGGCGAAATAGAAAGTTTTGGTACAGAGGAAGTGGTTATTATTTCAATTGTAGTCCTGGTGGCATTGTTCAGCATCCAACAGTTTGGTACCGGTAAAGTGGGTTTCATGTTTTCCCCTATACTTGCTCTGTGGTTCTTTTCTCTGGGTTCCATTGGAGCTTATAATATGGTTAAGCATGACATCACTGTTCTGAGAGCAATCAATCCAGCTTATATTTATTATTTCTTTAAGAAGAACGGGAAACATGCTTGGTCAGCTCTTGGTGGTTGTGTTCTGTGTATTACAGGTGCAGAAGCAATGTTTGCTGATCTGGGTCATTTTTCTGTGCAAGCAATTCAGATTGCCTTCACTTGTGTGGTATTTCCTTGTCTCCTCCTTGCTTATATGGGCCAAGCTGCTTATTTGATGAAGAACCCGGCTTCTTACGTAAATATATTCTACGATTCTGTTCCAGATAGTCTCTTCTGGCCAGTGTTTGTGATAGCAACACTTGCTGCTATGATTGCTAGCCAAGCAATGATATCTGCTACCTTTTCATGCATAAAGCAATCTATGGCTTTGGGATGCTTTCCCAGGATCAAGATAATTCACACCTCAAGAAAGTTCATTGGTCAAATTTACATCCCAGTCATTAATTGGTTTCTGATGGTCATGTGCATAATTATCGTTGCCATCTTCCAACACACTACTGATATTGCAAATGCATATGGCATTGCTGAAGTTGTTGTCATGTTGGTTAGTACATCTTTGGTGACACTTGTAATGGTTTTAATTTGGCAGACCAATTTTTTTTTGGCATTCTGTTTCCTACTCGTATTCGGATCGGTGGAGCTTATTTACATGTCTTCTGTACTAGCAAAAATAGCTGAGGGTGGCTGGCTTCCACTTGCCTTTGCTACCTTCTTCCTTTCTGTGATGTACACATGGAACTACGGGAGCGTATTGAAGTACCAAAGCGAAGTTAGGGAGAAGATTTCGTCGAACTTAATGCTCGACCTTGGTTCCAATCTTGGAACAGTAAGAGTGTCAGGAATAGGATTGCTATATAATGAGCTTGTCCAGGGCGTTCCCTCCATTTTCGCGCAGTTTCTGCTGACCCTTCCAGCTCTTCACTCTACCATAATTTTTGTCTGCATTAAATATGTCCCAGTCCCGGTCGTTCCTCAAGAGGAAAGGTTTCTATTCCGAAGAGTGTGCCCAAAAGATTACCATATGTTCCGCTGTGTTGCCAGGTATGGTTACAAAGATGTAAGGAAGGAAGATCACCATGCATTTGAGCAGCTTCTTATCGAAAGTCTCGATAAATTCTTGAAAAAGGAGGCTCGAGAATCTGCCTTGGAGAGCAACATTGTTGAAGACATCGACAGTGTCTCGACGAAATCCAAGTATTCCGATCTTCCTGCTGATAACGTGACCGATGAACTCAGGATTCCACTAATGCTTGGTCGAAATTCCGAAGAAACAGGAACTTCTACCTCTCGGAAACCTGCAGCAGCATTACCATCAAGTTATCTGTCATCAGATGAAGATCATAGTCTTGAATATGAGCTTTCAGCCCTTAGAGAAGCAATGGCATCAGGATGCACTTATTTGCTTGGACATGGTGATGTGAGAGCAAATAAAAACTCATTTTTCATTAAGAAATTGGTGATCAATTATTTCTATGCATTTCTGAGAAAGAACTGTAGAGGAGGCACTGCAAACATGAGAGTACCTCACACCAATATCATTCAAGTTGGTATGACATATATGGTATGA 2517 0.4156 MENGGIEECSVKLLDSFCNYGSSESRWVDGSEVDSMEHEPPPSRSNEGREGYDSLRRRLVKKPKRVDSFDVEAMEISRTQDHHSKDASLLPTLALAFQTLGVVYGDMGTSPLYVFADVFSKVPIESDVDILGALSLVMYTITLIPLAKYVFIVLKANDNGEGGTFALYSLICRFANVGLLPNRQQADEHISSFRLKVPSLEMKRALKIKDTLEKNKSLKTLLLLLVLLGTSMVIGDGILTPAMSVLSAVSGLQGEIESFGTEEVVIISIVVLVALFSIQQFGTGKVGFMFSPILALWFFSLGSIGAYNMVKHDITVLRAINPAYIYYFFKKNGKHAWSALGGCVLCITGAEAMFADLGHFSVQAIQIAFTCVVFPCLLLAYMGQAAYLMKNPASYVNIFYDSVPDSLFWPVFVIATLAAMIASQAMISATFSCIKQSMALGCFPRIKIIHTSRKFIGQIYIPVINWFLMVMCIIIVAIFQHTTDIANAYGIAEVVVMLVSTSLVTLVMVLIWQTNFFLAFCFLLVFGSVELIYMSSVLAKIAEGGWLPLAFATFFLSVMYTWNYGSVLKYQSEVREKISSNLMLDLGSNLGTVRVSGIGLLYNELVQGVPSIFAQFLLTLPALHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHHAFEQLLIESLDKFLKKEARESALESNIVEDIDSVSTKSKYSDLPADNVTDELRIPLMLGRNSEETGTSTSRKPAAALPSSYLSSDEDHSLEYELSALREAMASGCTYLLGHGDVRANKNSFFIKKLVINYFYAFLRKNCRGGTANMRVPHTNIIQVGMTYMV* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0604 838 MobiDBLite consensus disorder prediction 735 758 - -
Lan17g0604 838 Pfam K+ potassium transporter 96 669 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lan17g0604 838 TIGRFAM kup: potassium uptake protein 95 838 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lan17g0604 838 MobiDBLite consensus disorder prediction 30 53 - -
Lan17g0604 838 PANTHER POTASSIUM TRANSPORTER 12-RELATED 23 838 - -
Lan17g0604 838 MobiDBLite consensus disorder prediction 737 758 - -
Lan17g0604 838 MobiDBLite consensus disorder prediction 24 53 - -
Lan17g0604 838 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 23 838 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0604 Lan-Chr17 5070752 5076651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0604 21 838 Inorganic Solute Cotransporters AT1G60160 73.325 0.0 1214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0604 K03549 - gmx:100814419 1296.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0604 17 5070752 5076651 Lan18g0680 18 12034561 12040779 LSH
Lan17g0604 17 5070752 5076651 Lan6g0597 6 5231769 5237853 LSH