Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0599 ATGGCTGACAACAATTCCTCAAATGGGTCACCACCGTCTAATTCCGGCAACGATTCGCCTCCTCCGACGCCACCTTCCCCGCCTTCCGATGATTCAGAGCCTCCTCAAAGTTCGCCATCAAAGTCTCCGCCCCCGCCTTCTCCGCCGAATTCTCCGCCACCGTCGCCACCACCGAATTCTCCGCCGCCTCCATCTCAATCTGCACCGCCACCCCCATCTAAATCTCCTCCACCTTCCTCGTCCCCGCCACCACCATCGCCGCCTCCACCGTCACAGTCTCCACCTCCTGCGCCGAAATTATCACCACCACCACCTTCTAACATTTCACCACCTCCTAAGAGTCCACCGCCACAAAATACTTCACCTACTCCCCCCGCTCAACCACCCCCAACACCACCACCGGCGGCACCACCACCTTCAACACCAACACCACCACCGTCCAATGGTGATTCTCCACCTCCTAGCCCCTCTCAGCAGTCATCTCCACCGCAACCTCAAACCCCTCCTCCTCCTCCTCCTAATAAAACATTTTCTCCTCCAACTCCACCAGCACCCGGTTCAAATGTTACTCCGGCTAAGACGCCGCCACCTGGACCGGTGCCAAAATCTCCACCGTTTTCTCCCCCTACCCCACGTCCAAAACCAGGTGTTACTCCTTCTAATAGCCCCTCCCCGCCGTCTTCGCATGATGCCGGTGACAATAATACAGGAAAAATTGTTGGCCTTACCATTGGTGGGGTTGCAATTCTTGCCGTTCTTGCTCTAATTCTCATTTTAGTATGCAGGCGCAACAAAAAGCGAGGAAATCCTTATGCTCTTCCACCCCCTAATAGGTTTCATCATAGGAACAGAGGTGCAAATGTGCAATACTATGTAGAGGAGAAAGGTGTCGGGAATGCTTCACATGATGGGTTTTATAGTACACAACTTTCATCTCCTGTAACCAACCATTCAGAACCAGCATCACAGCCCATGGGTCAGATGATTTTTAGTTATGACAAGGTTTTGGAAATAACTGATGGATTTTCTAGTCAGAACGTGATAGGGGAAGGAGGATTCGGGTATGTTTACAAGGCTTCTATGCCAGATGGTAGAATTGGAGCAGTTAAGCTACTGAAGGCGGGTGGTGGGCAGGGAGAGAGGGAGTTCAGGGCTGAGGTGGATAGTATCAGCCATATTCATCATCGACATTTGGTATCATTACTTGGTTATTGCATATGCGAGCAGAAAAGGGTCCTTATCTATGAGTTTGTTCCTAATGGCAATCTCAGTCACCACATGCATGGAAGTGGTGTGCCAGTTTTGAGTTGGGAAAAGAGGATGAAGATAGCATTTGGTGCATCAAGGGGCTTGGCATATCTGCATGAGGGGTGCAACCCAAAGATTATCCACAGAGACATCAAGTCGGCAAACATTCTATTGGATGATGCTTTTGAGGCACAGGTTGCAGACTTTGGACTTGCCAAACTAACCGACGATGCTGATACCCATGTATCAACTAGGGTGATGGGAACCTTCGGGTACATGGCTCCCGAATATGCAACTAGTGGAAAATTAACAGATAGATCAGATGTCTTCTCATTTGGAGTTGTCCTCCTTGAGCTTATAACTGGAAGGAAACCTGTTGATGCAACACAACCTGTGGGAGAAGAGAGTTTGGTTGAGTGGGCTCGCCCACTTCTCCTTCGTGCAATTGAGACAGGTGACTTTAGTGAACTAGTGGATCCAAGACTTGAAGGACAATACGTCGATGGTGAAATGTTCAGAATGATTGAGGCAGCGGTAGCATGTGTTCGCCATTCTGCTCCAAAACGGCCTCGTATGGTTCAGGTGGCAAGAGCCTTAGACACTGGAGATCAATATGATCTATCTAATGGGGTGAAATATGGTCAGAGCACTGTTTATGATTCCGACCAATACAACAAAGACCTAATGAGATTCAAAAGGATGGCCAATGGCAGTTTTGGTGAATCTGATTCGGATTCGTATAGTTCAGATTACAGATCCAAAGAGATGTCTGCACCCCAATATCAGTGGAGGCAAAGTACTTCAAGTATTGATTCAGAAGCTAAAACTTTCTACAGCCTTAAGAACAGCATTGCTGAGAACAGGTCTTGA 2118 0.4868 MADNNSSNGSPPSNSGNDSPPPTPPSPPSDDSEPPQSSPSKSPPPPSPPNSPPPSPPPNSPPPPSQSAPPPPSKSPPPSSSPPPPSPPPPSQSPPPAPKLSPPPPSNISPPPKSPPPQNTSPTPPAQPPPTPPPAAPPPSTPTPPPSNGDSPPPSPSQQSSPPQPQTPPPPPPNKTFSPPTPPAPGSNVTPAKTPPPGPVPKSPPFSPPTPRPKPGVTPSNSPSPPSSHDAGDNNTGKIVGLTIGGVAILAVLALILILVCRRNKKRGNPYALPPPNRFHHRNRGANVQYYVEEKGVGNASHDGFYSTQLSSPVTNHSEPASQPMGQMIFSYDKVLEITDGFSSQNVIGEGGFGYVYKASMPDGRIGAVKLLKAGGGQGEREFRAEVDSISHIHHRHLVSLLGYCICEQKRVLIYEFVPNGNLSHHMHGSGVPVLSWEKRMKIAFGASRGLAYLHEGCNPKIIHRDIKSANILLDDAFEAQVADFGLAKLTDDADTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELITGRKPVDATQPVGEESLVEWARPLLLRAIETGDFSELVDPRLEGQYVDGEMFRMIEAAVACVRHSAPKRPRMVQVARALDTGDQYDLSNGVKYGQSTVYDSDQYNKDLMRFKRMANGSFGESDSDSYSSDYRSKEMSAPQYQWRQSTSSIDSEAKTFYSLKNSIAENRS* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0599 705 SMART serkin_6 342 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0599 705 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 87 685 - -
Lan17g0599 705 Pfam Protein tyrosine and serine/threonine kinase 345 553 IPR001245 GO:0004672|GO:0006468
Lan17g0599 705 PRINTS Proline rich extensin signature 4 25 - -
Lan17g0599 705 PRINTS Proline rich extensin signature 28 44 - -
Lan17g0599 705 PRINTS Proline rich extensin signature 45 62 - -
Lan17g0599 705 PRINTS Proline rich extensin signature 64 89 - -
Lan17g0599 705 PANTHER RECEPTOR-LIKE KINASE 87 685 - -
Lan17g0599 705 ProSiteProfiles Protein kinase domain profile. 342 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0599 705 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Lan17g0599 705 MobiDBLite consensus disorder prediction 1 234 - -
Lan17g0599 705 SUPERFAMILY Protein kinase-like (PK-like) 315 615 IPR011009 -
Lan17g0599 705 Gene3D Transferase(Phosphotransferase) domain 1 418 631 - -
Lan17g0599 705 Gene3D Phosphorylase Kinase; domain 1 306 417 - -
Lan17g0599 705 CDD STKc_IRAK 348 616 - -
Lan17g0599 705 MobiDBLite consensus disorder prediction 15 222 - -
Lan17g0599 705 MobiDBLite consensus disorder prediction 655 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0599 Lan-Chr17 5025477 5031870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0599 75 667 Trihelix Transcription Factor Family AT1G70460 52.097 3.64e-180 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lan17g0599 PK_Tyr_Ser-Thr 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0599 - - lja:Lj2g3v1414850.1 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0599 17 5025477 5031870 Lan18g0019 18 149902 158872 LSH