Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0587 ATGAAGAAAGTAATCACTCTCATCTCTTCTCAGTGGCTTGTTTTCCTTCTCATTAAGTCACTATTACTATCACAAACAGCAATGGCAGAACCAAGGGCGAAAACAGTCCTAATAACATGTGGCCATGAACTAGAGCATAACACCACTATCTTTGTTCCAAATTTTGTTGCAACAATGGACAAAATCAGTGAACAGATGCGCAATACTGGCATGGGAAAAGCTGTTACAGGGACAGGACCTGATACTAACTATGGCCTGGCTCAGTGCTATGGAGATCTTTCATTACTTGACTGTGTATTATGCTATGCCGAAGCCCGCACAGTTCTTCCCCAATGTTTCCCTTATAATGCTGGTCGAATTTACCTTGATGGTTGCTTCATGAGGTCTGAGAATTATAGTTTCTTTAATGAGTATACAGGACCAGGAGATAGAGCTGTATGTGATAAAACAGCTAAGAAGGACTCACGTTTTCAAGCAGCAGCAAAGCAAGCAGTTTTAAGTGCAATCCAAGATGCACCCAACAATAACGGCTATGCTAGGGGGAAGGTTGCTGTATCAGGAACAGCAAACGAATCTGCTTATGTTCTGGCTGATTGTTGGAAGACTTTGGACACAAGATCTTGCAAAGCTTGTCTTCAGAATGCATCTTCTTCCATGTTGGGATGCTTGCCCTGGTCAGAAGGGCGAGCGCTTAACACCGGTTGCTTCATGAGGTACTCGGACAAAGATTTTCTTAACAAGGAACTTAAAAATGGGAGTTCAAGAGGTACTGTAGTAGTGATAGTGGTTGCAGTAATCAGTTCAGTAATTGTTTTGGTGGTTGGAGTAGGCATTGCAGTTTATATCCGGAAACAGAGATACATTCAAAAGAAACGAAGAGGTTCAAGTGATGCAGAAAAGTTAGCAAAGACCCTTCAGCATAGTAGCTTGAACTTCAAGTACTCTACACTAGACAAGGCTACAGGGTCTTTTGATGAAACTAACAAATTAGGGCAAGGAGGATTTGGAACGGTTTATAAAGGAGTTCTAGCTGATGGAAGAGAGATTGCTATCAAGAGGTTATATTTCAACAACAGACACAGAGCAGCAGATTTCTACAATGAAGTCAACATAATTAGTAGTGTGGAACATAAGAACTTAGTCAGATTGTTAGGCTGTAGTTGTTCAGGACCTGAAAGCCTGCTTGTATACGAATTTCTGCCCAACAGAAGTCTTGATCGCTTCATTTTTGATAAAAACAAGGGCAGAGAACTGAACTGGGAGAAGAGATATGAAATTATCATTGGGACAGCTGAAGGATTAGTTTACCTGCATGAGAACTCCAAAGTAAGAATTATACACAGAGATATAAAAGCCAGCAACATCTTATTGGATGCAAAGTTTCGTGCTAAAATAGCAGATTTTGGTTTGGCGAGGTCCTTGCAAGAAGACAAAACCCACATAAGCACAGCTATCGCAGGAACTCTGGGGTATCTAGCTCCAGAGTATCTAGCTCATGGTCAGTTAACAGAAAAGGCAGACATATATAGTTTTGGAGTGGTATTGCTAGAGATAGTTACCGGAAGACAGAACAACAGGAGCAAAACATCAGAGTATACCGACAGCCTAGTTACAGTGACATGGAAGCATTTTCAGTCAGGAACTGCAGAACAACTACTTGATCCAAATCTAGGATTGCATGATGACGATCACAGTGGCAATGTTAAGAATGAGATTTTAAGAGTGGTCCACATAGGGCTTCTATGCACTCAAGAGATCCCTTCATTGAGACCATCTATATCAAAGGCACTACATATGTTAACAAAGAGGGAAGAGAACCTTCCAGCTCCCTCTAATCCACCCTTCCTAGATGAGAGTACTATGGAACTCCATGACACAAGTGGTGACCCATTTTACCTTCTCAATGCATCAGATTCAATCGCTACTATGTCCCATAGCTCTTTTTATCCCAGGTAA 1956 0.4136 MKKVITLISSQWLVFLLIKSLLLSQTAMAEPRAKTVLITCGHELEHNTTIFVPNFVATMDKISEQMRNTGMGKAVTGTGPDTNYGLAQCYGDLSLLDCVLCYAEARTVLPQCFPYNAGRIYLDGCFMRSENYSFFNEYTGPGDRAVCDKTAKKDSRFQAAAKQAVLSAIQDAPNNNGYARGKVAVSGTANESAYVLADCWKTLDTRSCKACLQNASSSMLGCLPWSEGRALNTGCFMRYSDKDFLNKELKNGSSRGTVVVIVVAVISSVIVLVVGVGIAVYIRKQRYIQKKRRGSSDAEKLAKTLQHSSLNFKYSTLDKATGSFDETNKLGQGGFGTVYKGVLADGREIAIKRLYFNNRHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEFLPNRSLDRFIFDKNKGRELNWEKRYEIIIGTAEGLVYLHENSKVRIIHRDIKASNILLDAKFRAKIADFGLARSLQEDKTHISTAIAGTLGYLAPEYLAHGQLTEKADIYSFGVVLLEIVTGRQNNRSKTSEYTDSLVTVTWKHFQSGTAEQLLDPNLGLHDDDHSGNVKNEILRVVHIGLLCTQEIPSLRPSISKALHMLTKREENLPAPSNPPFLDESTMELHDTSGDPFYLLNASDSIATMSHSSFYPR* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0587 651 SMART serkin_6 324 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0587 651 ProSiteProfiles Protein kinase domain profile. 324 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0587 651 ProSiteProfiles Gnk2-homologous domain profile. 33 134 IPR002902 -
Lan17g0587 651 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 9 632 - -
Lan17g0587 651 ProSiteProfiles Gnk2-homologous domain profile. 139 244 IPR002902 -
Lan17g0587 651 Pfam Protein kinase domain 325 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0587 651 Gene3D Transferase(Phosphotransferase) domain 1 400 608 - -
Lan17g0587 651 Pfam Salt stress response/antifungal 147 241 IPR002902 -
Lan17g0587 651 Pfam Salt stress response/antifungal 50 132 IPR002902 -
Lan17g0587 651 Gene3D - 144 244 IPR038408 -
Lan17g0587 651 Gene3D - 34 134 IPR038408 -
Lan17g0587 651 SUPERFAMILY Protein kinase-like (PK-like) 309 625 IPR011009 -
Lan17g0587 651 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 9 632 - -
Lan17g0587 651 CDD STKc_IRAK 330 602 - -
Lan17g0587 651 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Lan17g0587 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Lan17g0587 651 Gene3D Phosphorylase Kinase; domain 1 284 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0587 Lan-Chr17 4923165 4928477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0587 1 651 Receptor kinase-like Gene Family AT1G70520 66.616 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan17g0587 Pkinase 8.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0587 - - gmx:100804094 1093.18