Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0572 ATGGAATTCGAAGATCAAGAAGAGCAAGAGGAAGAGCTTTGTTTCAACCCAATGGGAAACCCGAGCCGGGTTAAAATACCCGGTTCAGTTGAACCCATGATGATGCCTCAACCTGTTAGGAGCAGCAACAACGCCAGGTACAGGGAGTGTTTGAAGAACCACGCCGTCGGCATCGGTGGTCACGCTCTCGACGGCTGCGGCGAGTTCATGCCGGCTGGAACAGAAGGAACCCTCGACGCACTCAAATGCGCCGCCTGCAACTGCCATCGCAACTTCCACCGCAAGGAAACCGACACCTCCGCCATAGTCACCGGTTCAGACCCTTTTCTCCTAACTAACCACCCTCACCAGGCTCACCATTACCAGCCACCACCGCATTTTGCGGCGTACTACCGTTCCCCGGCGGGGTACCTTCACGTGGGGGGTGGACATCACCCGAGAGGTGCTGTGCCGGGAGGAGCACTAGCTTTGCCGTCGATCTCCGGTGGCGGCGTAGGAGGATATGGGACCCAGGGCATGAGGGAGGATCAAGAAGATATGTCGTATCCGATGAGTGGTGGAGGGATGAAGAAGAGGCACAGGACAAAGTTCACTCAGGAGCAGAAGGACAAAATGCTTGAACTTGCGGAGAGGCTAGGTTGGGGAATTCAGAAGCATGATGAGAGTGTGGTCCAGGAGTTCTGTAACGAGACTGGGATCAAGCGTCACGTTCTTAAGATTTGGATGCATAACAACAAGCACACTCTTGGTAAGAAGCCCTAG 762 0.5472 MEFEDQEEQEEELCFNPMGNPSRVKIPGSVEPMMMPQPVRSSNNARYRECLKNHAVGIGGHALDGCGEFMPAGTEGTLDALKCAACNCHRNFHRKETDTSAIVTGSDPFLLTNHPHQAHHYQPPPHFAAYYRSPAGYLHVGGGHHPRGAVPGGALALPSISGGGVGGYGTQGMREDQEDMSYPMSGGGMKKRHRTKFTQEQKDKMLELAERLGWGIQKHDESVVQEFCNETGIKRHVLKIWMHNNKHTLGKKP* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0572 253 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 32 252 - -
Lan17g0572 253 SUPERFAMILY Homeodomain-like 179 251 IPR009057 -
Lan17g0572 253 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 47 96 IPR006456 -
Lan17g0572 253 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 32 252 - -
Lan17g0572 253 MobiDBLite consensus disorder prediction 1 21 - -
Lan17g0572 253 Pfam ZF-HD protein dimerisation region 45 97 IPR006456 -
Lan17g0572 253 Gene3D - 175 251 - -
Lan17g0572 253 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 190 246 IPR006455 -
Lan17g0572 253 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 46 96 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0572 Lan-Chr17 4704853 4706034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0572 1 249 ZF-HD Transcription Factor Family AT4G24660 49.004 1.18e-64 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lan17g0572 ZF-HD_dimer 1.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0572 - - gmx:100808910 328.561