Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0571 ATGGACACACCCAATGGACCCGGATCCGAAAACCTAATTGTTGCATGCACCACCATGCTCTCCTACCGCCGCTTCTCCACCTGCCGCGACTTCGCCACCCGCATCCCCCGGCCCGACCCCACTACCTCCCTCTCCCTCGACAAGATCATCGCCATCGCCGACATTCTCTCCGCCGTCGACCGCCGCCTCCCCAACAACCTCCCCGACCACTACTCCATCCTCCAGCTCCGCCGCGACGACGCAGCCCGCGACCGCGACCTCCTCACGCGCCAGTTCAAGAACCTCGCTCTCCTTCTTGACCCCACCGCCGCTAACAAATTCCCCTTCTCTGACGAAGCCCTCACGTGCGTCCGTGAGGCTTGGCACGTGCTCTCTGACCCCAAAAGCCGCGACCTTTACCACTCCCAGATCGGTTACCAGCCACCCAATCCAACATTCTGGACCGCGTGCCCTTACTGTTGGAACCTTTTTGAGTATGAGAGTAAGTACGAGGATTACCCCTTGCTGTGTCAGAGTTGTGAAAAAGCGTTTCACGGCGTTCCGGTGACGGCTCCGGTGAAGGATGATGATCAGAAGAAGGAGTACTATTGGTGTCAAGCAAGTGTGCCCTTGAGGTATAGAGATAAGGAAGAGAACAACAACTACATGTTTCTGAAAAGTACTCATTTTGATGAAACCAATTTTGTGTACATTTCTGATGATGATGATGTTGTTGGAGGTAATGAAGGGTTTGGGAAGAATGTGGGAAAAGAGGTTTGGGGTGATGTGAGGAATCAAGGGTTTCAATTTCAGGGGAATGCTGCAAATTCACAAGTTGAATTGGAAGGGAATAGTGGGAAGAAGAAGATGAGGATGAAGACTGTGGCAAGGAGGGGTGCTGAGAACATGGGGAGGGGCAGGCAGAGAGGTTTTCGTGTCGATAATGACTTGGATATGGATGCAGGTGAAGATGACTTGGAGTTCACTGAAGGAGATGGAGATGTCTTCATTGGTGTAAGGTTTGATGAGTGA 1011 0.5252 MDTPNGPGSENLIVACTTMLSYRRFSTCRDFATRIPRPDPTTSLSLDKIIAIADILSAVDRRLPNNLPDHYSILQLRRDDAARDRDLLTRQFKNLALLLDPTAANKFPFSDEALTCVREAWHVLSDPKSRDLYHSQIGYQPPNPTFWTACPYCWNLFEYESKYEDYPLLCQSCEKAFHGVPVTAPVKDDDQKKEYYWCQASVPLRYRDKEENNNYMFLKSTHFDETNFVYISDDDDVVGGNEGFGKNVGKEVWGDVRNQGFQFQGNAANSQVELEGNSGKKKMRMKTVARRGAENMGRGRQRGFRVDNDLDMDAGEDDLEFTEGDGDVFIGVRFDE* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0571 336 SUPERFAMILY Chaperone J-domain 63 136 IPR036869 -
Lan17g0571 336 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 335 - -
Lan17g0571 336 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 335 - -
Lan17g0571 336 Pfam DnaJ domain 69 133 IPR001623 -
Lan17g0571 336 Gene3D DnaJ domain 65 141 IPR036869 -
Lan17g0571 336 SMART dnaj_3 68 129 IPR001623 -
Lan17g0571 336 ProSiteProfiles dnaJ domain profile. 69 137 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0571 Lan-Chr17 4696257 4697586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0571 9 206 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 35.537 9.32e-34 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0571 - - lang:109350398 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0571 17 4696257 4697586 Lan18g0729 18 12632777 12634893 LSH
Lan17g0571 17 4696257 4697586 Lan6g0548 6 4795182 4796204 LSH
Lan17g0571 17 4696257 4697586 Lan17g1196 17 20269144 20270356 PCT
Lan17g1196 17 20269144 20270356 Lan17g0571 17 4696257 4697586 PCT