Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0558 ATGGATCCAACCCACTCGATCGATTTTCAGCAATACCCACAAGCCCTAATCTCAGAGCACAAAGATTCGGTAATGGAAGATTCCGATGAATCCTTGCTCGATTCAATGGTTTGTGATTCTAGTTCAAGATTGATCCCAACTGGGTTTACAAGACCCGACAACGCAGATGGGGAGTATTTCATGTTTGTGAATGCGGGTGGTGAAGCTTTTAATGATGCAGATGGCGGATTAACTTTCCTGAGTGACACCTTTTTTGATGGTGGGAATGTTTTTCGTACTGATGAGCAGATAGTGGGTGCTGGAGATTACCCGTTTATATATCAATCAGCTCGACTAGGAACTTTTTGCTATAGGTTTGACAATATTCCTCCAGGAAACTATGTTATTGATCTTCATTTTGTGGAGATCATTAACACAAATGGGCCAAAAGGAATGAGGGTATTCAATGTATACATCCAAGAAGAAAAGGTTCTGTCGGAATTAGATATCTTTGCAGTTGCTGGAGCCAATAAGCCACTACAGTTGACTGATTCAAGGGTGCGTGTGAAGGATGATGAAGTAATCCTCATAAGATTTGAAAGTATAAATGGAAGCCCACTAGTCAGTGGGATTGGCATTAGGAAAGCAACAAAGGTGTCAGTTCCACAAGTGACGAGTGACTACATTAAATGTAACTACTGTGCTATGGAGACTGAAATTCCTTCACCACAGAAAGTTATGTGGACGAAATCTACTGCAAAATACGAGAATAAGATTAAAGAACTTACTATGCAATGTGAGCTCAAAGCAAAAGAATGCTATGAGGCATGGACATCATTAACTGCAACCAATGAGCAATTGGAAGCAACCCAAATGGAATTAGACAAAGTGACATTTAAGTCACTCAGTATTGATCAAACTTTGGAGAAACAGGCTGAAAACCTGAGGAGTATTTCTAGCAGGTATGAGCTTGATAAGAAGAAATGGGCAGAAGAAATTATTAGTTTACAGGAAAAAGTAAAGTTGATGAAGAGTGACTATTGTCAGCTTTCCTTTGAAGCACATGAATGTGTTGATTCGATCCCTGAATTAAATAAGATGGTTTTTGCTGTTCAGGAATTGGTTAAGCAATGTGAAGATCTCAAAGTGAAGTACAACGAAGAGATGACACAGAGAAAAAAGCTCTTCAATGAAGTTCAAGAGGCTAAAGGGAACATTAGGGTTTTCTGCCGCTGTCGTCCATTGAATAAGGTTGAAATCTCAGTTGGGTGTTCAACAGTGGTGGATTTTGATGCAGCAAAGGATGGATGCCTAGGAATTTTGACAAGTGGCTCCACTAAAAAGTCATTCAGATTTGACAGAGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCATCATCAATGGCAGTCTCTGTGTTAGATGGCTACAATGTTTGCATCTTTGCCTACGGGCAAACAGGAACAGGAAAAACATTTACCATGGAGGGAACAGAAAACAATAGAGGAGTAAATTACAGGACTCTTGAGCTCTTGTTTAAAATTAGCAAGGAAAGGAGTGAAACATTTGCATATGACATATCTGTTAGTGTGTTTGAGGTTTATAATGAACAAATCAGAGACCTATTGGCTACAGGACCAACATCAAAAAGGTTGGAGATAAAACAAGCCTCTGAAGGATCTCATCATGTTCCTGGTGTTGTAGAAGCCAAGGTTGATAACATTAGTGAAGTGTGGAATGTACTGCAGGCTGGAAGTAATGCTAGAGCAGTTGGGAGTAATAACATCAATGAGCATAGCAGTCGATCTCACTGCATGCTTTGTATAATGGTAAAGGCTAAAAATTTGATGAGTGGTGAGTGTACAAAGAGCAAGCTCTGGCTTGTGGATTTGGCAGGTAGTGAGAGACTTGCAAGGACTGATGTGCAAGGGGAGCGGCTTAAGGAAGCACAAAATATCAACAGATCTCTTTCAGCTCTTGGGGATGTGATATCAGCTTTAGCAGCCAAAAGTAGTCACATTCCGTATAGGAACTCGAAATTGACACACTTACTGCAAGACTCATTAGGAGGTGACTCCAAAACTTTGATGTTTGTACAAATCAGCCCATCAGACCAGGACGTAAGTGAGACTCTAAGCTCACTTAATTTTGCAACAAGAGTGAGGGGCGTTGAGTTAGGTCCTGTTAAGAAGCAAATCGACACAGGTGAACTTCAAAAGATAAAAGCAATGCTTGAAAAGGCGCGGACTGAGTGCAGAATTAAAGATGAGTCTATACGTAAAGTAGAAGAAAACTTGCAAAGCATGGAGAGTAAGGCCAAAGGCAAGGATAATCTTCTAAAAAATTTACATGAAAAGATTAAAGAACTTGAAGGCCAGATTGAGTTGAAGACATCCATGCAGAATCAGATAGAGAAACAAATTTCCCTATTATCAGAGAAATTGAAAGGAAAAGAAGAAACCTGCAGTACTCTCCAACAAAAGGTGAAAGAGCTGGAGAAAAGGCTGAAAGATCAACTGCAGTCAGAGACGGCAAGTTACCAACAGAAGGTGTTGGAGCTGGAAAAGAAGCTGAAAGATCAATTGCAAGGGTCAGAGTCTCAGTCTGCCATTCTAAAAGAAAAGGTGAAGGAGCTTGAGAGAAAATTGAAGGACCAGGATCAGAATTCTGAGTTGTCCTTCTATCATCAACAGGTGAAGGAGCTTGAGAGAAAACTGAAGGAGCAGGATCAGAATTCAGAGCTGTCCTTCTATCGTGAACAGGTCAAGGAGCTTGAGAAAAAACTGGAGCAGCAGCAACAGACCTCAGAGTTGACCTTGCTTCGACAACAAGTGAAGGAACTAGAGGACAGGAACAGAGAACAAGAGCAACAGTGGCAACAAACTAATTGTTTTGTTGAAGCAGCAAAGGCCACACCTGACATAGGCAAAGGATGCAAAACAAGTGAGAAATGCCCAAGTGAGATTGACCCTCATATTTTAAGGAGTTCAAACTCATCAAACCACCAGATAAATCAAGGTTCTACTTTGTCCAAAGGGAATGATTTTACTCAACATTTAAGAAGTAAAGGAGGTTTCAGAAGCAATGAAATAGAGAACAGTTATGTCATGTCATCATCTTTACAGAAAAGGAAAGTCACAAGGAAATCTGATCCACCTATGATAGGAAAGGGTGTGAGGCCAATAACAAAGCCAGGCATTACTACTCAACCTCCTCCATTGTCTCACAAGAGAGCAAGCACTAGCAGAGATGTTCAAGGAATTAAAGAGAGGGACAGTAAGAAGAAAATTTGGAATAGATAG 3291 0.4035 MDPTHSIDFQQYPQALISEHKDSVMEDSDESLLDSMVCDSSSRLIPTGFTRPDNADGEYFMFVNAGGEAFNDADGGLTFLSDTFFDGGNVFRTDEQIVGAGDYPFIYQSARLGTFCYRFDNIPPGNYVIDLHFVEIINTNGPKGMRVFNVYIQEEKVLSELDIFAVAGANKPLQLTDSRVRVKDDEVILIRFESINGSPLVSGIGIRKATKVSVPQVTSDYIKCNYCAMETEIPSPQKVMWTKSTAKYENKIKELTMQCELKAKECYEAWTSLTATNEQLEATQMELDKVTFKSLSIDQTLEKQAENLRSISSRYELDKKKWAEEIISLQEKVKLMKSDYCQLSFEAHECVDSIPELNKMVFAVQELVKQCEDLKVKYNEEMTQRKKLFNEVQEAKGNIRVFCRCRPLNKVEISVGCSTVVDFDAAKDGCLGILTSGSTKKSFRFDRVYTPKDDQVDVFADASSMAVSVLDGYNVCIFAYGQTGTGKTFTMEGTENNRGVNYRTLELLFKISKERSETFAYDISVSVFEVYNEQIRDLLATGPTSKRLEIKQASEGSHHVPGVVEAKVDNISEVWNVLQAGSNARAVGSNNINEHSSRSHCMLCIMVKAKNLMSGECTKSKLWLVDLAGSERLARTDVQGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDVSETLSSLNFATRVRGVELGPVKKQIDTGELQKIKAMLEKARTECRIKDESIRKVEENLQSMESKAKGKDNLLKNLHEKIKELEGQIELKTSMQNQIEKQISLLSEKLKGKEETCSTLQQKVKELEKRLKDQLQSETASYQQKVLELEKKLKDQLQGSESQSAILKEKVKELERKLKDQDQNSELSFYHQQVKELERKLKEQDQNSELSFYREQVKELEKKLEQQQQTSELTLLRQQVKELEDRNREQEQQWQQTNCFVEAAKATPDIGKGCKTSEKCPSEIDPHILRSSNSSNHQINQGSTLSKGNDFTQHLRSKGGFRSNEIENSYVMSSSLQKRKVTRKSDPPMIGKGVRPITKPGITTQPPPLSHKRASTSRDVQGIKERDSKKKIWNR* 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0558 1096 ProSiteProfiles Kinesin motor domain profile. 398 720 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan17g0558 1096 Coils Coil 888 954 - -
Lan17g0558 1096 Gene3D - 56 211 - -
Lan17g0558 1096 SMART kinesin_4 396 728 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan17g0558 1096 Pfam Malectin domain 61 204 IPR021720 -
Lan17g0558 1096 Coils Coil 364 398 - -
Lan17g0558 1096 ProSitePatterns Kinesin motor domain signature. 620 631 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lan17g0558 1096 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 398 756 IPR027417 -
Lan17g0558 1096 Coils Coil 741 885 - -
Lan17g0558 1096 PRINTS Kinesin heavy chain signature 472 493 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan17g0558 1096 PRINTS Kinesin heavy chain signature 590 607 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan17g0558 1096 PRINTS Kinesin heavy chain signature 621 639 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan17g0558 1096 PRINTS Kinesin heavy chain signature 670 691 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan17g0558 1096 CDD KISc_C_terminal 396 722 - -
Lan17g0558 1096 PANTHER KINESIN-LIKE PROTEIN KLP-3 919 1082 - -
Lan17g0558 1096 PANTHER KINESIN-LIKE PROTEIN KLP-3 27 912 - -
Lan17g0558 1096 Pfam Kinesin motor domain 404 719 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan17g0558 1096 MobiDBLite consensus disorder prediction 1078 1096 - -
Lan17g0558 1096 PANTHER KINESIN-LIKE PROTEIN KIN-14R 919 1082 - -
Lan17g0558 1096 PANTHER KINESIN-LIKE PROTEIN KIN-14R 27 912 - -
Lan17g0558 1096 MobiDBLite consensus disorder prediction 988 1039 - -
Lan17g0558 1096 Gene3D - 722 886 - -
Lan17g0558 1096 MobiDBLite consensus disorder prediction 987 1096 - -
Lan17g0558 1096 Gene3D Kinesin motor domain 344 721 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0558 Lan-Chr17 4561112 4567767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0558 370 773 Calmodulin-binding Proteins AT5G65930 40.876 8.04e-84 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0558 K10406 - gmx:100800016 1629.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0558 17 4561112 4567767 Lan18g0739 18 12758919 12765480 LSH
Lan17g0558 17 4561112 4567767 Lan6g0530 6 4602998 4609554 LSH