Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0549 ATGGAATATCAACATAGTTGGATATTAAGACTGGTGTCATATATTATTTGCCTATACATATTCATCAGATCAGCTTCTGCAACTGAAGGGTTTGAGAGCATAGCATGTTGTGCTGATTCGAATTATACAGATCCATTGACCACCTTAAATTACACAACAGATTATAGTTGGTTCTCTGATAAAAGAAGTTGCAGACAAATAAGCAAGAACGTTTCGAACTATGGAAGCAACGAAAATGTTAGATTGTTTGATATAGATGAGGGAAAGAGATGCTACAATTTGCCAACAACTAAGAATGAAGTATATCTGATAAGGGGCATATTTCCATTCGATGAATTATCAAATTCTTCCTTTTATGTTACAATCGGGGTAACACAATTAGGTTCAGTGATATCATCCAGCCTCCAGGACTTGGGAATTGAAGGAGTTTTCAGAGCCACCAAAAACTACATAGACTTCTGCTTAGTGAAGGAGAAAGTAAATCCCTATATTTCTCAGCTTGAATTAAGGCCATTGCCTGAAGAGTACATAAACGGTTTGCCTACTAGCGTTTTAAAACTGATAAGCAGAAACAATCTTAAGGGCGAGGGAGATGACATCAGGTATCCAGTTGACAAAAGTGATAGAATCTGGAAAGGAACTTCAAATCCATCATATGCTCTTCCATTATCTTTCAATGCCATCAACTTTGACCCCAAAACTAATATGACTCCTCCTCTTCAAGTCCTACAAACAGCTCTTACTCACTCCGAGAAGTTGGAATTCATCCACAGTGACCTTGAGATTGAGGGCTATGAATACCGTGTGTTTCTCTACTTCCTTGAATTAAATAGCTCACTAAAAGCTGGCCAAAGGGTGTTTGACATTCATGTTAACAGTGAGGCTAAAGAGGAGAGGTTTGATATATTGGCTGAAGGGTCAAACTACAGATACACTGTCTTGAACTTTTCAGCAACTGGATCACTTAACCTAACCTTGGTCAAGGCATCTGGTTCTGAGAATGGACCCCTTTTGAATGCTTATGAGATTCTACAGGTTCGACCATGGATTGAAGAGACCAACCAAACAGACGTGGAAGTGATCCAGAAGCTGAGAAAAGAACTGCTGTTACAAAACCAAGACAATAAAGTCATTGAGAGTTGGTCTGGAGACCCTTGTATTATTTTCCCCTGGCAAGGAATAGCATGTGATAATTCATCTGTTATCACTGAGCTGGATCTTTCCTCGAGTAATCTCAAAGGAACAATTCCTTCCAGTGTCACTGAGATGACCAACTTAAAAATACTGAACCTGAGCCACAGCAGCTTCAATGGTTATATCCCATCGTTTCCTATGTCCTCCATGCTGATATCAATAGATCTGAGCTACAATGATCTTACGGGGTCACTTCCAGAATCAATTCCTTCGCTGCCAAACTTAAAATCACTATATTATGGCTGCAATCAACACATGAGTGAAAAGGCTCCAGAAAATTTGAACAGTTCGTTAATCAAGACAGATTGCGGAAAATGCCAGACAGATAATCCTAAATTTGGACAAATAATCGTTATTGGTGCTGTTACATGTGGATCAATCTTGATTACTTTGGCTGTTGGACTAATTTTTGTTTGCTGCTATAGACTTAAATTAACTCCATCAGAAGGATTTGGAGAAAAGAACTATCCAATGGCAACAAATATAATTTTCTCTTTGCCAGCAAGCAAAGATGATTTCTTCGTAAAGTCCTTGGCCGTGGCAATTCAAATATTCACTTTGGAATATATAGAGGTGGCCACAGAGCGGTACAAGACTTTAATAGGAGAAGGAGGGTTTGGCTCTGTTTACCGTGGCACTCTAGAAGATGGTCAAGAAGTGGCAGTGAAAGTTCGGTCAGCCACATCAACTCAGGGAACTAAAGAATTTGATAACGAGCTAAACCTACTTTCTGCAATACAGCATGAGAACCTGGTGCCTCTTCTTGGTTACTGTAATGAAAAGGATCAGCAAATTCTCGTTTATCCTTTTATGTCCAACGGTTCTTTGCAAGATAGATTATATGGGGAACCAGCAAAGAGAAAAATATTAGACTGGCCAACTAGACTCTCTGTTGCTCATGGTGCAGCTCGAGGTTTGGCATATCTTCACACATTTCCGGGACGTCCTGTAATACACAGAGATGTAAAATCAAGTAATATACTTCTGGATCATAGCATGTGTGCCAAAGTTGCAGATTTTGGTTTCTCAAAATATGCTCCTCAGGAAGGAGACAGTTATGTTTCCCTTGAAGTAAGAGGAACTGCGGGATATCTGGATCCTGAGTACTACTCAACCCAGCAATTATCTGAAAAGAGTGATGTCTACAGCTTTGGTGTGGTTCTACTTGAAATTGTGAGTGGCAGGGAACCTCTCAACATAAAGAGACCGAGGAATGAGTGGAGCTTGGTTGAATGGGCTAAACCATATATAAGAGCATCAAAGATTGATGAAATTGTGGATCCTGGCATCAAGGGAGGATATCACGCAGAGGCAATGTGGAGAATGGTGGAAGTAGCACTTCAATGTATTGAACCCCTGTCAGCATATAGGCCATGCATGGTTGACATTGTACGCGAGTTGGAGGATGCTCTCATTATAGAAAACAATGCATCCGAATACATGAAGTCCATAGACAGCCTTGGAGGGTCGAACCGCTACTCTATTGTCATGGAGAAAAGGGTGCTGCCGTCAACTTCATCATCTACAGCAGAATCAACCATCACCACTCAAACCTTGTCCCAACCACAGCCCAGATAG 2772 0.4055 MEYQHSWILRLVSYIICLYIFIRSASATEGFESIACCADSNYTDPLTTLNYTTDYSWFSDKRSCRQISKNVSNYGSNENVRLFDIDEGKRCYNLPTTKNEVYLIRGIFPFDELSNSSFYVTIGVTQLGSVISSSLQDLGIEGVFRATKNYIDFCLVKEKVNPYISQLELRPLPEEYINGLPTSVLKLISRNNLKGEGDDIRYPVDKSDRIWKGTSNPSYALPLSFNAINFDPKTNMTPPLQVLQTALTHSEKLEFIHSDLEIEGYEYRVFLYFLELNSSLKAGQRVFDIHVNSEAKEERFDILAEGSNYRYTVLNFSATGSLNLTLVKASGSENGPLLNAYEILQVRPWIEETNQTDVEVIQKLRKELLLQNQDNKVIESWSGDPCIIFPWQGIACDNSSVITELDLSSSNLKGTIPSSVTEMTNLKILNLSHSSFNGYIPSFPMSSMLISIDLSYNDLTGSLPESIPSLPNLKSLYYGCNQHMSEKAPENLNSSLIKTDCGKCQTDNPKFGQIIVIGAVTCGSILITLAVGLIFVCCYRLKLTPSEGFGEKNYPMATNIIFSLPASKDDFFVKSLAVAIQIFTLEYIEVATERYKTLIGEGGFGSVYRGTLEDGQEVAVKVRSATSTQGTKEFDNELNLLSAIQHENLVPLLGYCNEKDQQILVYPFMSNGSLQDRLYGEPAKRKILDWPTRLSVAHGAARGLAYLHTFPGRPVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYSTQQLSEKSDVYSFGVVLLEIVSGREPLNIKRPRNEWSLVEWAKPYIRASKIDEIVDPGIKGGYHAEAMWRMVEVALQCIEPLSAYRPCMVDIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVMEKRVLPSTSSSTAESTITTQTLSQPQPR* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0549 923 SMART serkin_6 593 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0549 923 Gene3D Phosphorylase Kinase; domain 1 599 669 - -
Lan17g0549 923 ProSiteProfiles Protein kinase domain profile. 593 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0549 923 Gene3D Ribonuclease Inhibitor 354 510 IPR032675 -
Lan17g0549 923 PANTHER OS07G0107800 PROTEIN-RELATED 61 883 - -
Lan17g0549 923 Pfam Malectin-like domain 38 346 IPR024788 -
Lan17g0549 923 ProSitePatterns Protein kinases ATP-binding region signature. 599 621 IPR017441 GO:0005524
Lan17g0549 923 PANTHER OS05G0525400 PROTEIN 61 883 - -
Lan17g0549 923 ProSitePatterns Serine/Threonine protein kinases active-site signature. 715 727 IPR008271 GO:0004672|GO:0006468
Lan17g0549 923 Pfam Protein tyrosine and serine/threonine kinase 597 865 IPR001245 GO:0004672|GO:0006468
Lan17g0549 923 SUPERFAMILY L domain-like 377 492 - -
Lan17g0549 923 MobiDBLite consensus disorder prediction 902 923 - -
Lan17g0549 923 Gene3D Transferase(Phosphotransferase) domain 1 670 882 - -
Lan17g0549 923 SUPERFAMILY Protein kinase-like (PK-like) 574 865 IPR011009 -
Lan17g0549 923 CDD STKc_IRAK 599 866 - -
Lan17g0549 923 Gene3D - 195 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0549 Lan-Chr17 4413287 4420732 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0549 15 872 Receptor kinase-like Gene Family AT1G67720 34.399 3.37e-137 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lan17g0549 Malectin_like 8.5e-47 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0549 - - gmx:100781986 1435.62