Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0528 ATGACATTGGTCATCAGAGAGAGGAGGCACCAACAAGCCCTAAGGCTTTCATTGCCACCACCTTCAACTCCATCATCTGATCACTTATGTCACCAAATCCATGTACCAGCATCGTTGCCATCACCATCAAATCATGAAAACTCTTCTCCTGGCATCAAGAACCTTTCTGATCTAAAGAAAGTTGCAGTTCTTGGCCATGGCAATGGTGGCACGGTATATAAAGTTCACCACAAGAAGAACCATTCCTTCTATGCATTGAAAGTCCTAAGATTCAATGAGAATAGCATTGGCATACGCCAACCTTCTATGATACTCGAGGCTGAGATTCTTAAACGTGTGGATTCTCCATTCATAGTAAAGTGTCATGCAGTTTTTGACAATGGTAATTGCACTGAAGCTGAAAATGGAAACGACCTTAGCTTTGTTATGGAGTACATGGAAGGAGGGTCATTGCATGACGTGTTGAGAGAAAACTATAGACTTCCGGAGGAGGCGATTTCTTTGTTGGCTAAGAGGGTGTTGGAAGGGTTAAACTATCTGCATGGCATGCACATTGTGCATAGAGATATAAAACCTTCAAACTTGCTTGTAAATGATAAAGGAGAGTTGAAGATTGCAGATTTTGGAGTTAGTCATATAGTGGAAGGAAGATTTGATGTAACTGAGTTAAATGCAGGAACATGTGCTTACATGAGCCCAGAAAGAGTTGATCCTGAAAGGTGGGGTGGTGAAAATGTGGATGAGTTTGCAGGAGATGTGTGGTCAATGGGAGTGGTAATGTTGGAATGTTTTTTGGGTTATTTTCCATTGATTGGTCCAGGGCAAAAACCAGATTGGGCAACATTGATGTGTGCAATTTGCTTTGGTGAGAAGCTAGAGATGCCCGAGAAGGCATCACCCGAATTTCAAAATTTTGTTAGGAGGTGTGTAGAGAAGGATTGGAGGAAGAGAGCAACAGTGAAAGAGCTTCTTCACCACCCTTTTGTGAATAGAAAGTGTTTCTGCATTGGCAAAGGGCTTGGTGACTATGTCATTCATGAATGA 1044 0.4205 MTLVIRERRHQQALRLSLPPPSTPSSDHLCHQIHVPASLPSPSNHENSSPGIKNLSDLKKVAVLGHGNGGTVYKVHHKKNHSFYALKVLRFNENSIGIRQPSMILEAEILKRVDSPFIVKCHAVFDNGNCTEAENGNDLSFVMEYMEGGSLHDVLRENYRLPEEAISLLAKRVLEGLNYLHGMHIVHRDIKPSNLLVNDKGELKIADFGVSHIVEGRFDVTELNAGTCAYMSPERVDPERWGGENVDEFAGDVWSMGVVMLECFLGYFPLIGPGQKPDWATLMCAICFGEKLEMPEKASPEFQNFVRRCVEKDWRKRATVKELLHHPFVNRKCFCIGKGLGDYVIHE* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0528 347 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 10-LIKE 5 332 - -
Lan17g0528 347 ProSiteProfiles Protein kinase domain profile. 58 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0528 347 SUPERFAMILY Protein kinase-like (PK-like) 56 330 IPR011009 -
Lan17g0528 347 SMART serkin_6 58 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan17g0528 347 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 5 332 IPR045269 GO:0004674|GO:0006914
Lan17g0528 347 Gene3D Transferase(Phosphotransferase) domain 1 53 336 - -
Lan17g0528 347 ProSitePatterns Protein kinases ATP-binding region signature. 64 87 IPR017441 GO:0005524
Lan17g0528 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Lan17g0528 347 CDD PKc_MAPKK_plant_like 56 330 - -
Lan17g0528 347 Pfam Protein kinase domain 60 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0528 Lan-Chr17 4133823 4135310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0528 1 332 MAP Kinase Kinase Gene Family AT1G32320 53.313 1.94e-110 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Lan17g0528 Pkinase 6.4e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0528 K20604 - gmx:100817973 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0528 17 4133823 4135310 Lan18g0774 18 13180816 13182394 LSH