Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0514 ATGGGCAGCAGTGAGATGGAAAAAACCGCAAAAGATAAGGAGTCTAAGACGCCTCCTCCTACGTCACAGGAGCAGTCTTCGACAACCAGTGCTGGAACAAATAATCCTGACTGGTCCACCTTTCAGGCATATTCTCCTATGCCTCCACATGGCTTCTTGGCATCAAGTCCCCAAGCCCACCCATATATGTGGGGTGTCCAGCATATTATGCCTCCCTATGGCACTCCACCACCTCCCTATGTTGCAATGTATCCCCATGGTGGCATATATGCTCATCCATCAATGCCTCCGGGATCCTATCCTTTTAGTCCTTTTGCCATGCCATCTAATGGTATTGTTGAGGCTTCAGGAAATACTCCTGGAAGCATGGAAGCGGATGTTGTTAAGCCTCCTGAGGTGAAGGAAAAATTGCCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACAGGGAAAAATAATGAACATAGTAAAACACCAGGGACATCTGCTAATGGAATTCATTCAAAGAGTGGTGAGAGTGGAAGTGAAGGTACCAGTGAAGGAAGCGATGCTAATTCTCAGAATGACTCTGAATTGAAATCAGGGGGCAGGCAAGATTCATTTGAAGAAGAACCATCTCAAAATGGCACTTTGGCACATGCTTCTCAAAATGGAGGGCTTACTGCATCTCATACAGTGGTTAACCAAACTATGTCTATGGTACCTATTTCTGCCGGTGGTGCTCCTGGAACAGTTCCTGGACCCACAACAAATTTAAATATAGGAATGGATTATTGGGGTGCACCAACTTCAGCCAACATTCCTGCAATGCATGGAAAGGTTCCAACTCCTGCAGTTGCTGGAGGGATGGTTACTAATGGATCGCGGGATAGTGTTCAGTCTCAGCTTTGGCTGCAGGATGAAAGAGAGCTTAAAAGACAAAGACGGAAGCAGTCTAACAGGGAATCTGCTCGCAGATCCAGGTTGCGCAAACAGGCCGAGTGTGATGAACTTGCTCAGCGCACTGAGGCTTTGAAAGAAGAAAATGATTCTCTTCGGTCAGAAGTAAGTCGAATCAGAAGCGAATATGAGCAGCTACTCTCTGAGAATGCAGCACTCAAGGAGAGACTCGGGGAACCCGGTAACGATGATCCCAGGTCTGGAAGAAACGATCAGCATGTGGATAATGACACTCAACAAAGTGGGCAAACTCATTAG 1209 0.4607 MGSSEMEKTAKDKESKTPPPTSQEQSSTTSAGTNNPDWSTFQAYSPMPPHGFLASSPQAHPYMWGVQHIMPPYGTPPPPYVAMYPHGGIYAHPSMPPGSYPFSPFAMPSNGIVEASGNTPGSMEADVVKPPEVKEKLPIKRSKGSLGSLNMITGKNNEHSKTPGTSANGIHSKSGESGSEGTSEGSDANSQNDSELKSGGRQDSFEEEPSQNGTLAHASQNGGLTASHTVVNQTMSMVPISAGGAPGTVPGPTTNLNIGMDYWGAPTSANIPAMHGKVPTPAVAGGMVTNGSRDSVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRTEALKEENDSLRSEVSRIRSEYEQLLSENAALKERLGEPGNDDPRSGRNDQHVDNDTQQSGQTH* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0514 402 MobiDBLite consensus disorder prediction 19 42 - -
Lan17g0514 402 MobiDBLite consensus disorder prediction 205 221 - -
Lan17g0514 402 MobiDBLite consensus disorder prediction 133 221 - -
Lan17g0514 402 Gene3D - 308 362 - -
Lan17g0514 402 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 307 370 IPR004827 GO:0003700|GO:0006355
Lan17g0514 402 MobiDBLite consensus disorder prediction 1 43 - -
Lan17g0514 402 MobiDBLite consensus disorder prediction 146 198 - -
Lan17g0514 402 SUPERFAMILY Leucine zipper domain 308 364 IPR046347 GO:0003700|GO:0006355
Lan17g0514 402 Pfam bZIP transcription factor 305 367 IPR004827 GO:0003700|GO:0006355
Lan17g0514 402 MobiDBLite consensus disorder prediction 1 18 - -
Lan17g0514 402 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 401 - -
Lan17g0514 402 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 312 327 IPR004827 GO:0003700|GO:0006355
Lan17g0514 402 MobiDBLite consensus disorder prediction 367 402 - -
Lan17g0514 402 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 401 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lan17g0514 402 Pfam Disordered region downstream of MFMR 135 272 - -
Lan17g0514 402 CDD bZIP_plant_GBF1 310 360 IPR045314 GO:0003700|GO:0006355
Lan17g0514 402 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Lan17g0514 402 SMART brlzneu 305 369 IPR004827 GO:0003700|GO:0006355
Lan17g0514 402 MobiDBLite consensus disorder prediction 307 327 - -
Lan17g0514 402 Coils Coil 325 373 - -
Lan17g0514 402 MobiDBLite consensus disorder prediction 373 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0514 Lan-Chr17 3992632 4000976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0514 1 399 bZIP Transcription Factor Family AT2G35530 63.882 2.08e-163 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan17g0514 MFMR_assoc 1.5e-60 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0514 K09060 - gmx:100101882 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0514 17 3992632 4000976 Lan18g0792 18 13380233 13386577 LSH