Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0501 ATGACAACAAACGTAAACTGTGAAATGCCTCATAACAAAACCATTGTTCCTCACCCTCATTGGTATTCACCAAAAACTGGTATTTACAATAGTAAGTACGCTCCTTTGGACCTTCCCATTGATCCTTTTGTTGACGTTGTTTCTTATATTTTTTCACATCAACATAATGGGGTTTCAGCACTTGTTGATTCTTCATCTGGGTATTCCATTCCTTACTCAAAGTTGTTACCTTTAGTCAAATCCATAGCCTCTGGCCTAAAAAAAATAGGTGTTAAACAAGGTGATACCGTTTTGCTTTTACTTCCAAATTCTATTTACTATCCCATTGTGTTATTGGGTGTTCTGTATCTAGGTGCTGTTGTTACACCATTGAATCCTCTTAGTAGTGTATCAGAAATACATAAGCAAATCAATGACTGTGGTGTGAGTCTGGTGTTTACTGTAATTGAAAATGTGAAGAAACTAGAGTTATTAGGCATTCCTATCATTACTGTGCCAGAAAATGAAAAGGGTTTGAATGATGATTGTTTCTCAGGTTTTTGTAACTTGATTTATGGTGGTGACTTTGATTTTCATAGTAGGCCTGTTATTAAACAGGAAGATACTGCTGCTATATTGTATTCTTCGGGGACTACAGGTGCGAGCAAAGGAGTTGTTCTAACTCATAAAAATCTTGTTTCTATGGTTGAGCTTTTTGTGAGATTTGAAGCTTCTCAATATGAATACTCTTGCTTGAACAATGTGTTTCTAGCTGTTTTGCCTATGTTTCACGTATATGGTCTATCGCTATTCGCTATCGGATTGCTGTCTTTGGGTTCTACAATCATCGTGATGAGGAAATTTGACATCGATGAGGTTATTGCAGCGATCGATAAATATAAAGTTACTCACTTTCATGTTGTTCCCCCAATATTGACCGCGTTGACAAAGAGGGCAAAAGGTATTCATGGTAGTAAGTTGCAGAGCTTGATACAGGTCTCCAGTGGTGCAGCACCTTTGAGTGGAAAAGTTATTGATGACTTTGTCCAAACTTTCCCTAATGTTGATTTTATACAGGGTTATGGAATGACTGAATCGACTGCAGTAGCAACACGTGGCTTGAATACCGGAAAGTTTCATAATTATTCTTCAATAGGGTTGTTAGCTCCAAACATGGAGGCAAAAGTGGTAGACTGGAACAGTGGTGAATTTTTGCCCCCAGGCAGCAGTGGTGAGCTTTGGTTGAGAGGGCCTTCAATTATGAAAGGATACTTAAATAACGAGGAAGCGACGATGTCAACAATTGATAAAGATGGTTGGCTACATACTGGAGATGTTGTTTATTTTGATGAGCATGGATATATACATATATCTGACCGCTTGAAAGATATTATCAAATACAAGGGCTTTCAGATTGCCCCTGCTGATTTAGAAGCTGTGTTAATTTTGCATCCGGAAGTAGCCGATGTTGCTATTACAGCCGCCGAGGATGAAGAAAATGGGGAGATACCGGTGGCATTTGTGGTCAGGAAGGTTGGAAGTGTGCTTACTGCAAAGCATCTTATGGATTATGTTGCTAAGCAGGTTGCTCCATACAAGAAGGTTAGGAAAGTAGTCTTCACTGACAAGATACCGAGGTCCGCAACCGGGAAGATCCTTCGAAAGCAGCTAAGGAATTTCCAGACTTCTAAACTCTAA 1677 0.3924 MTTNVNCEMPHNKTIVPHPHWYSPKTGIYNSKYAPLDLPIDPFVDVVSYIFSHQHNGVSALVDSSSGYSIPYSKLLPLVKSIASGLKKIGVKQGDTVLLLLPNSIYYPIVLLGVLYLGAVVTPLNPLSSVSEIHKQINDCGVSLVFTVIENVKKLELLGIPIITVPENEKGLNDDCFSGFCNLIYGGDFDFHSRPVIKQEDTAAILYSSGTTGASKGVVLTHKNLVSMVELFVRFEASQYEYSCLNNVFLAVLPMFHVYGLSLFAIGLLSLGSTIIVMRKFDIDEVIAAIDKYKVTHFHVVPPILTALTKRAKGIHGSKLQSLIQVSSGAAPLSGKVIDDFVQTFPNVDFIQGYGMTESTAVATRGLNTGKFHNYSSIGLLAPNMEAKVVDWNSGEFLPPGSSGELWLRGPSIMKGYLNNEEATMSTIDKDGWLHTGDVVYFDEHGYIHISDRLKDIIKYKGFQIAPADLEAVLILHPEVADVAITAAEDEENGEIPVAFVVRKVGSVLTAKHLMDYVAKQVAPYKKVRKVVFTDKIPRSATGKILRKQLRNFQTSKL* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0501 558 Gene3D - 28 455 IPR042099 -
Lan17g0501 558 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 15 557 - -
Lan17g0501 558 CDD 4CL 38 550 - -
Lan17g0501 558 Gene3D - 456 556 IPR045851 -
Lan17g0501 558 ProSitePatterns Putative AMP-binding domain signature. 205 216 IPR020845 -
Lan17g0501 558 Pfam AMP-binding enzyme C-terminal domain 470 544 IPR025110 -
Lan17g0501 558 Pfam AMP-binding enzyme 54 460 IPR000873 -
Lan17g0501 558 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 15 557 - -
Lan17g0501 558 SUPERFAMILY Acetyl-CoA synthetase-like 55 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0501 Lan-Chr17 3893365 3897477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0501 10 558 Monolignol Biosynthesis Gene Families AT4G19010 58.423 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0501 K01904 - gmx:100804808 888.641