Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0500 ATGAGTGTTCCTAATACCACTCCGGCTATGATGTTCACGGCGGCTCAACCACTTTTCACGGTGGCTCAGTGGCAGGAGTTGGAGCACCAAGCTCTTATCTTCAAGTACTTGAAAGCTGGTCTCACTGTTCCACCAGACCTCCTCGTACCCATTCAGAAGAGTTTACAATCGATTATGTCTCATCAAAATTACCCATCTTTGGGTTATTATGGGAATGGAAAGAAGATAGACCCAGAACCTGGAAGATGCAGAAGAACTGATGGGAAAAAATGGAGATGTTCAAAGGATGCACACCCTGATTCTAAATACTGTGACCGCCACATGATACGACGTCGTTGCCGTTCAAGAAAGCTAGTGGAATCTCAATCACAATCTTCTTCTTCTTCTTCTGTTGCTACTACTGGGACCACAACTACTACTGCTACTGTTTCTGCTGCATCTGGAACTGGAACCTTCCAGAATCTTCCTTTGCACACTAGTTGTACTCGTCAAGGTTTCACTATTGGGAATGGGAACAACAGCACCATGAATATGATGGAGCCTTTGCCTCTTACTACTGAGGATTCAAGGAAAGAGTTAAGGTTTGGACTGAGCTCAGAAGCAGATGAGCACAACTTCTTGCAGAAAGATCTCGGAACTATGAGACATCAAAGTTATTACGACTTCACATCAGACGACACATGGTCTCTTATGTCTCAGATTCCGCAAAACATCATTTCGGAATCAAGAAATCGTTCTACTGTGGTCAACAACTGCTTCCAACAGCAAACAATGCGAGATACCGAGCTTTTAAATCTCTACGACAACGGAAGGTCCAAGGAACTTGTCTTCGATGGCCAATTAAGCTCACCGGGGTGTCTGAAACAGGAATATCAGTCCCCTCAGTCTCTCTTCAGTGACTCTCACTTGAAGATGGATTTAAGCTCCTCTACCATTGACTATAGACCCATCATAGATTTTAATTGCAACCCAGATGAGAATTGA 984 0.439 MSVPNTTPAMMFTAAQPLFTVAQWQELEHQALIFKYLKAGLTVPPDLLVPIQKSLQSIMSHQNYPSLGYYGNGKKIDPEPGRCRRTDGKKWRCSKDAHPDSKYCDRHMIRRRCRSRKLVESQSQSSSSSSVATTGTTTTTATVSAASGTGTFQNLPLHTSCTRQGFTIGNGNNSTMNMMEPLPLTTEDSRKELRFGLSSEADEHNFLQKDLGTMRHQSYYDFTSDDTWSLMSQIPQNIISESRNRSTVVNNCFQQQTMRDTELLNLYDNGRSKELVFDGQLSSPGCLKQEYQSPQSLFSDSHLKMDLSSSTIDYRPIIDFNCNPDEN* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0500 327 ProSiteProfiles QLQ domain profile. 18 53 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan17g0500 327 MobiDBLite consensus disorder prediction 119 137 - -
Lan17g0500 327 PANTHER GROWTH-REGULATING FACTOR 13 326 - -
Lan17g0500 327 Pfam WRC 78 120 IPR014977 -
Lan17g0500 327 MobiDBLite consensus disorder prediction 115 137 - -
Lan17g0500 327 PANTHER - 13 326 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lan17g0500 327 SMART QLQ_2 17 53 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan17g0500 327 Pfam QLQ 19 52 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lan17g0500 327 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0500 Lan-Chr17 3883775 3887419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0500 13 120 GRF Transcription Factor Family AT3G13960 54.701 1.56e-37 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lan17g0500 WRC 6.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0500 - - gmx:100809947 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0500 17 3883775 3887419 Lan18g0809 18 13519238 13522638 LSH
Lan17g0500 17 3883775 3887419 Lan6g0453 6 3784393 3785003 LSH