Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0499 ATGTTTACATGCATATCTTGTACAAAGCAAACAGCAGAAGAAAAGGAAGAAGAAGAAGGGCGTGAAGGTGGCACGCCAAGAACAGCCGTCAAAAGCCTCACAACACAGATCAAGGATATGGCACTGAAGTTTTCAGGCGCTTATAAGCAGTGCCAACCATGCACAGGGTCCAGCAGTACCTACAAGAAAGGACAAAGACCATATCCTGACTTTGACACCATTTCAGAAGGGGTTCCATACCCCTATATTGGAGGTGCAAGCTCAAGTTCAACTCCTGCTTGGGACTTTACAAGCTCCAATCATCCTGGTGGTAGATATATTGGGGGATTCGGTGGTGACAGAGGTCGTGACTCAACAGCATCGTTGTCGGTCTGTGATGTCGTGTTGGAAGATGAGGCTGAAGCTAAGGAGTGGATGGCACAAGTGGAGCCAGGGGTGCACATAACCTTTGTTTCTCTACCCAATGGTGGAAATGACCTTAAGAGAATTCGATTCAGCCGGGAGATGTTCAATAAATGGGAAGCTCAAAAATGGTGGGGTGAAAATTTCGACCGCATCATGGAACTTTACAATGTGCAGAGATTCAATCGACAAGCTCTCAACACTCCTTCAAGATCTGAGGATGAGCCAAGAGATTCTTCTTACTCCAGATTGACATCTGCAAGAGAGAGTCCCATGACCTCGTCCTTGAACAAGGATTGGACACCGCGGAGTCACTATAAACCCTCAGCAAACAGAGGGTATAACCCCACTGAGCCTTGTAATCAAAGTCGCGGGGTAGAATTTCAGGCAGGACCATCCATGGAAGCATCAAGGACAACCACCTCCTCTAGAGACGAACCTTCAATTAGCAATGCCAGCGAGATAGAGGCCGAATGGATCGAAGAAGATGAACCTGGAGTCTACATTACAATCAGGCAGTTAGCTGATGGCACAAGGGAGCTTCGGCGTGTGAGGTTCAGCCGAGAAAAATTTGGAGAGGTACATGCAAAGAATTGGTGGGAAGAAAATAGGGAGAGAATACAAGCTCAGTACCTTTGA 1041 0.4707 MFTCISCTKQTAEEKEEEEGREGGTPRTAVKSLTTQIKDMALKFSGAYKQCQPCTGSSSTYKKGQRPYPDFDTISEGVPYPYIGGASSSSTPAWDFTSSNHPGGRYIGGFGGDRGRDSTASLSVCDVVLEDEAEAKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWEAQKWWGENFDRIMELYNVQRFNRQALNTPSRSEDEPRDSSYSRLTSARESPMTSSLNKDWTPRSHYKPSANRGYNPTEPCNQSRGVEFQAGPSMEASRTTTSSRDEPSISNASEIEAEWIEEDEPGVYITIRQLADGTRELRRVRFSREKFGEVHAKNWWEENRERIQAQYL* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0499 346 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 346 - -
Lan17g0499 346 Pfam Transcription factor BRX N-terminal domain 29 54 IPR027988 -
Lan17g0499 346 Pfam Transcription factor regulating root and shoot growth via Pin3 290 345 IPR013591 -
Lan17g0499 346 Pfam Transcription factor regulating root and shoot growth via Pin3 136 190 IPR013591 -
Lan17g0499 346 ProSiteProfiles BRX domain profile. 291 346 IPR013591 -
Lan17g0499 346 ProSiteProfiles BRX domain profile. 136 191 IPR013591 -
Lan17g0499 346 MobiDBLite consensus disorder prediction 217 284 - -
Lan17g0499 346 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 346 IPR044532 -
Lan17g0499 346 MobiDBLite consensus disorder prediction 201 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0499 Lan-Chr17 3858414 3867723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0499 1 346 Major Intrinsic Protein MIP AT1G31880 66.006 1.68e-161 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0499 - - gmx:100819016 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0499 17 3858414 3867723 Lan18g0811 18 13530044 13534175 LSH
Lan17g0499 17 3858414 3867723 Lan6g0451 6 3763994 3770605 LSH