Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0486 ATGTTCAGTGGTGGAGGTGACGACGGCCTCGCGGCACGCCTCGGCATTGTGCCGCCGTCGCTGCTGAATCATACAACGCCGTCGTTGATCTCGCCGGAGATATCGACGTCTCTAGCTTCGAGGGAGGAGAGGGGTCCGTCTCAACCGCAGTGGAGCCAACAAGAGACGATGGAGTTCATAGCGATTCGAGCGGAGCTAGAGAGAGATTTCACTGCGTCGAAGAGGACCAAGACGCTTTGGGAAGTAGTGAGTTCGAAGATGAGAGAGAGAGGGTTCAGGAGGAGCCCTGAGCAGTGCAAATGCAAGTGGAAGAACCTTGTTAATCGCTATAAGGGAAAAGAGACATCTGATCCAGAGCATGGCAGGCATTGCCCATTTTTTGAAGAATTGCATGCAATATTTACCCAAAGAGCACATAACATGCAACGGTTGCTTCTAGAATCCGAGACTCGCTCAACTCAGCCAAAGAAAGTGGTGAAAAGAGTAAGTGGAGATCGGTCCTCTGAGGAATTCTCAGAAGATGATGATGAGGTGGCAGAGAATAGTGACGATGAGAAACCTGCTAGAAGCAATACGCGCAAAAGGAAAGTCGACAAAGTTGCAATGGAGAAGTATTCAAAGGCAAACAATCCATCAAATTCCCTCAATAATACTACCACTAGTGTTCAGGAAATGCTCAAGGAATTTTTCCAGCACCAGCTAAGGATGGAGATGCAATGGAGGGAGATGATGGAAAGGCGTGCCCATGAAAGGGAACTGTTTGAACAGGAATGGAGGCAGTCCATGGAGAAGCTTGAGAGGGAGAGATTGATGATTGAACATGCATGGAGGGAGAGGGAAGAACAGAGGCGAATAAGAGAAGAGAGTCGGGCAGAGAGAAGGGATGCTTTGTTGACAACCCTTCTGAACAAACTCATTCATGAATCTAACTAA 933 0.4834 MFSGGGDDGLAARLGIVPPSLLNHTTPSLISPEISTSLASREERGPSQPQWSQQETMEFIAIRAELERDFTASKRTKTLWEVVSSKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHGRHCPFFEELHAIFTQRAHNMQRLLLESETRSTQPKKVVKRVSGDRSSEEFSEDDDEVAENSDDEKPARSNTRKRKVDKVAMEKYSKANNPSNSLNNTTTSVQEMLKEFFQHQLRMEMQWREMMERRAHERELFEQEWRQSMEKLERERLMIEHAWREREEQRRIREESRAERRDALLTTLLNKLIHESN* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0486 310 PANTHER - 47 308 - -
Lan17g0486 310 SMART sant 47 109 IPR001005 -
Lan17g0486 310 Gene3D - 51 112 - -
Lan17g0486 310 PANTHER - 47 308 - -
Lan17g0486 310 MobiDBLite consensus disorder prediction 182 203 - -
Lan17g0486 310 CDD GT1 49 114 - -
Lan17g0486 310 ProSiteProfiles Myb-like domain profile. 51 107 IPR001005 -
Lan17g0486 310 MobiDBLite consensus disorder prediction 146 217 - -
Lan17g0486 310 MobiDBLite consensus disorder prediction 153 168 - -
Lan17g0486 310 Pfam Myb/SANT-like DNA-binding domain 49 133 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0486 Lan-Chr17 3745221 3747513 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0486 31 310 Trihelix Transcription Factor Family AT2G38250 43.662 1.18e-49 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan17g0486 Myb_DNA-bind_4 1.9e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0486 - - lang:109330481 555.829