Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0481 ATGGAGAGCACAAGAATAGGTCAAAGGTTAAACCTTATAGTAGTATGTGTACTCCTATTACTGAAGACAGAAGCTTCTTCTTATGTACCAATCACTTATGTCCGAAATGCGGTAGCCAAAGGAGCCGTTTGTTTGGATGGGAGTCCTCCAGCTTACCATTTTGATAAGGGATTTGGTGCAGGGATTAATAGTTGGTTAGTTCAATTTGAGGGAGGAGGATGGTGCAACAATGTCACTACTTGCCTTTCTCGAAAGTACAATCGTTTAGGTTCATCCAAGCAAATGGCAAAGCAAATTGCCTTTTCTGGAATCTTAGGTAACAAGCACCAGTTCAATCCAGATTTCTACAACTGGAACAGAATCAAGGTTAGGTACTGTGATGGGGCATCATTTACTGGTGATGTGGAAGCAGTAAATCCTGTAACCAAGTTGCACTTCAGAGGAGCAAGGGTTTTTACTGCTGTCGTCGAGGATTTACTCGCAAAAGGAATGAAAAATGCTCGAAACGCTATTATATCTGGATGTTCAGCTGGAGGATTGACTTCAATATTGCATTGTGATCGCTTTCGAGCACTATTACCTACACGAGCTCAAGTTAAATGCATCTCGGACGCTGGTTATTTTATCAATGCAAGGGATGTCGCTGGAACACGACACATTGAACAGTTCTTCAGTCAAATTGTTGCAACACATGGCTCTGCTAGGAATTTGCCTCCATCATGCATTTCAAGACTCAGCCCAGGGCTGTGCTTTTTCCCGCAATATTTTGTATCACAAATCGCTACACCAATCTTCCTTATAAATGCGGCATATGACTCATGGCAGATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTCTTGGCCATTGGCATAGCTGCAAGCTTGATATAAACAACTGCTCATCCAATCAACTTGGTACAATGCAAGGCTTCAGGACAGAATTCTTAAGAGCATTGACTGTGCTAGGGAACTCTCAATCTAAAGGAATGTTTATAGACTCTTGCTATGCTCACTGCCAAACTGAAATGCAAGAGACATGGTTCACAAGTGACTCTCCGCTCCTGGCCAAGACAACAATTGCAAAGGCAGTAGCAGACTGGTTTTATGATAGAAGGCTTTTCCATCAGATAGATTGTCCTTATCCTTGCAATCCAAGTTGCCACAACCGAATTTTTGATCCACGGCACGACAACCCTGGAATATAG 1209 0.4268 MESTRIGQRLNLIVVCVLLLLKTEASSYVPITYVRNAVAKGAVCLDGSPPAYHFDKGFGAGINSWLVQFEGGGWCNNVTTCLSRKYNRLGSSKQMAKQIAFSGILGNKHQFNPDFYNWNRIKVRYCDGASFTGDVEAVNPVTKLHFRGARVFTAVVEDLLAKGMKNARNAIISGCSAGGLTSILHCDRFRALLPTRAQVKCISDAGYFINARDVAGTRHIEQFFSQIVATHGSARNLPPSCISRLSPGLCFFPQYFVSQIATPIFLINAAYDSWQIKNILAPGVADPLGHWHSCKLDINNCSSNQLGTMQGFRTEFLRALTVLGNSQSKGMFIDSCYAHCQTEMQETWFTSDSPLLAKTTIAKAVADWFYDRRLFHQIDCPYPCNPSCHNRIFDPRHDNPGI* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0481 402 Pfam Pectinacetylesterase 24 373 IPR004963 GO:0016787
Lan17g0481 402 PANTHER NOTUM-RELATED 3 396 IPR004963 GO:0016787
Lan17g0481 402 PANTHER PECTIN ACETYLESTERASE 3 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0481 Lan-Chr17 3704258 3708981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0481 12 400 Carbohydrate Esterase AT4G19420 61.792 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0481 K19882 - gmx:100776478 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0481 17 3704258 3708981 Lan6g0428 6 3580425 3586992 LSH