Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0475 ATGGAAATACCAAGTACCATGTTGTCCTTGTTTGTTTCTTTTCTCTTCATTCTTGTTCTTTTCAAGACATTCATAAAACTCTTTGTCTCCAAACGCCAACACTTGCCACTCCCACCTGGCTCAATGGGATATCCTTACATAGGAGAAACATTTCAAATGTATTCTCAAGACCCAAATGTCTTCTTTGCCACAAAAATAAAAAGGTATGGCTCTATCTTCAAATCCCACATTTTAGGTTGTCCATGTGTGATGATTTCAAGCCCAGAAGCTGCAAAGTTTGTGCTCAATAAAGCTCATCTATTCAAGCCAACATTCCCAGCAAGCAAAGAGAGGATGTTGGGAAAACAAGCTATCTTTTTTCACCAAGGAGAGTACCATGCTAACTTGAGAAAGCTTGTACTTCGTACCTTCATGCCTGAATCCATCAAAAACATTGTTCCTGCAATTGAATCCATTGCCCAAGATTGTCTTAAATCATGGGAAGGACGTGAAATATTCACTTTCCTTGAAATGAAGACGTTCACCTTCAACGTTGCCCTACTTTCAATATTTGGAAAAGAAGAAGTTATGTATAGAGAGGATCTGAAAAGGTGTTACTACACTCTTGAGCAAGGGTACAATTCAATGCCAATTAACCTTCCTGGAACACTGTTCCACAAGGCCATGAAAGCAAGGAAAGAACTTGCACAGATTGTAGCACAGATAATCTCAAAGAGGAGACAAGAGAAACAAGAGTATAAGGACTTGTTGGGTTCATTCATGGAAGAGAAAGCAGGGCTCACAGATGAACAAATAGCAGATAATGTAATTGGTGTCATATTTGCAGCGCGTGATACCACTGCCAGTGTTCTTACATGGATTGTTAAGTACCTTGGTGAAAATCCTAGTGTCCTACAAGCTGTAACTGAGGAGCAAGAATCTATATTGAAGAGCAAAGAAGAAAGTGGTGAAGAGAAGGGTTTGAATTGGGAAGATGCTAAAAAGATGCAAATAACTTCAAGGGTTATACAAGAGACTCTAAGAGTTGCTTCAATTTTGTCCTTTACTTTTAGAGAAGCAGTGGAAGATGTTGAGTATCAAGGGCATCTTATACCAAAGGGATGGAAAGTACTACCACTATTCAGAAATATACACCATAGTCCAGACAACTTCAAAGAGCCAGAGAAGTTTGATCCCTCAAGATTTAAGGCTGCACCAAAAGCCAATACTTTTATGCCATTTGGAAGTGGGATCCATGCATGTCCAGGGAATGAATTAGCCAAGTTGGAGATGCTAGTGCTTCTACATCATCTGACCACAAAGTACAGATGGTCTATGGAGGGTGCAAAGAATGGAATCCAGTATGGTCCTTTTGCTCTTCCCCAAAATGGCTTGCCTATTACATTATATCACAAATTATGGAATGAATAG 1410 0.395 MEIPSTMLSLFVSFLFILVLFKTFIKLFVSKRQHLPLPPGSMGYPYIGETFQMYSQDPNVFFATKIKRYGSIFKSHILGCPCVMISSPEAAKFVLNKAHLFKPTFPASKERMLGKQAIFFHQGEYHANLRKLVLRTFMPESIKNIVPAIESIAQDCLKSWEGREIFTFLEMKTFTFNVALLSIFGKEEVMYREDLKRCYYTLEQGYNSMPINLPGTLFHKAMKARKELAQIVAQIISKRRQEKQEYKDLLGSFMEEKAGLTDEQIADNVIGVIFAARDTTASVLTWIVKYLGENPSVLQAVTEEQESILKSKEESGEEKGLNWEDAKKMQITSRVIQETLRVASILSFTFREAVEDVEYQGHLIPKGWKVLPLFRNIHHSPDNFKEPEKFDPSRFKAAPKANTFMPFGSGIHACPGNELAKLEMLVLLHHLTTKYRWSMEGAKNGIQYGPFALPQNGLPITLYHKLWNE* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0475 469 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0475 469 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0475 469 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0475 469 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0475 469 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Lan17g0475 469 Pfam Cytochrome P450 38 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0475 469 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 13 463 - -
Lan17g0475 469 Gene3D Cytochrome P450 28 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0475 469 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0475 469 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0475 469 PRINTS E-class P450 group I signature 284 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0475 469 PRINTS E-class P450 group I signature 333 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0475 469 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0475 469 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0475 469 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan17g0475 469 PANTHER CYTOCHROME P450 26 13 463 - -
Lan17g0475 469 SUPERFAMILY Cytochrome P450 32 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0475 Lan-Chr17 3654693 3657833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0475 1 460 Cytochrome P450 AT4G19230 71.092 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0475 K09843 - gmx:100170674 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0475 17 3654693 3657833 Lan18g0843 18 13792554 13795009 LSH
Lan17g0475 17 3654693 3657833 Lan6g1536 6 22513127 22517203 LSH