Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0471 ATGCCACAAAACTGCATAGCACCAAAACCACAATATTCCAATAGTAATCATATGGAAGAACCACCAGAGCTCACTCAGCCCCATAATCCAAGTGTCCTTGCCACTATGTACCCCATAACTTTGAAGTTTAAGGAAGTGGTGTACAAAGTAAAACTAGAGCATAAAGGACTATGTTGGGGCAGCACATGGACTTGCAAAGAGAAAACCATATTGAATGGTATGTCAGGTGTGGTATGTCCAGGAGAAATACTTGCTATGCTAGGGCCATCAGGTAGTGGCAAAACCACACTTCTTACGGCTCTCGGAGGCCGCCTCGGCGGTAAAATATCCGGAGAAATCACATACAACAATCACCCTTTCTCAGGTTCCATAAAAAGAAGAACAGGTTTTGTGGCTCAGGATGATGTGCTATATCCTCATCTTACTGTCACTGAGACTCTAGTCTTCACTGCACTTCTAAGGCTTCCTAACAGCTTAACAAGAGATGAAAAAGTTCAGCATGTAGAGAGAGTTATTGCTGAGCTAGGACTCAGTAGATGCAGGAGTAGCATGATTGGAGGCCCAATGTTGAGAGGAATATCAGGTGGTGAGAAAAAGAGAGTGAGTATAGGCCAAGAAATGCTCATCAATCCAAGCTTGTTATTGCTGGATGAGCCTACTTCAGGTTTGGATTCCACCACAGCTCTAAGGATCCTCAGCATGATCAAACGACTCGCGAGTGGTGGTAGAACTGTTATCACCACCATTCATCAACCCTCTAGCCGCCTCTACTATATGTTTGATAAGGTGGTCTTGCTCTCTGAAGGGTGTCCTATCTATTATGGTCCTGCTTCAACTGCCTTGGACTACTTTTCATCAATCGGTTTTTCGACATGTGTGACTGTCAATCCAGCTGATCTCTTGCTTGATCTTGCCAACGGGATTGCGCCGGATTCCAAGCATGCAACTGAACAAAGTGAGAGCCTGGAACAAGAAAGGAAGGTGGTAAGAGAAACTCTCATCTCTGCTTATGACAAGAACATAGCTACAAGGTTGAAAGCTGAGCTTTGCAGCCTAGAAGTGAACAATCAAACTATCACAAAAGATGCTTGCACAAAGAGTCACACAAAACATGAGCAATGGTGCACAAGTTGGTGGCATCAGTTCAAGGTACTATTACAAAGGGGAGTGAGGGAAAGAAGACATGAAGCCTTCAACAGGCTGAGAATATTCCAAGTCGTAAGTGTCGCTTTTCTTGGCGGACTTTTGTGGTGGCATACACCAGAATCACACATTCAAGACCGGGTGGCCTTGATCTTTTTCTTCTCAGTTTTCTGGGGATTCTACCCTCTCTACAATGCAGTTTTCACATTTCCTCAAGAGAGGAGAATGCTGATCAAGGAACGTTCATCGGGAATGTACCGGCTTTCATCCTACTTTCTAGCTAGAACAATAGGAGACTTACCACTTGAGCTTGCACTTCCAACAGCATTTGTCTTCATAATCTATTGGATGGGAGGGCTTAAACCTGATCCTGTGACCTTTATCCTTTCTCTTCTTGTAGTTCTTTACAGTGTTGTTGTCTCTCAAAGTCTTGGCCTAGCATTTGGTGCTATCCTGATGGAAGTTAAACAAGCAACTACTCTAGCTTCTGTGACAACTTTTGTTTTTCTCATTGCTGGAGGATACTATATACAACAAATTCCACCCTTCATAGTTTGGCTCAAGTACATGAGCTACAGCTACTACTGTTACAAGTTACTTCTCGGTGTGCAGTACAATGATGATGATTATTATGAGTGCTCAAAAGGGGTCTTGTGCAAGGTTATAGATTTTCCTCCTATAAAATCAGTGGGTTTGAATCATATGTGGGTTGATCTGTCCATTATGGCACTGATGTTGCTCGGTTATCGACTAGTCGCTTATTTAGCGCTGCGTAGAGTGAAGTAG 1929 0.4339 MPQNCIAPKPQYSNSNHMEEPPELTQPHNPSVLATMYPITLKFKEVVYKVKLEHKGLCWGSTWTCKEKTILNGMSGVVCPGEILAMLGPSGSGKTTLLTALGGRLGGKISGEITYNNHPFSGSIKRRTGFVAQDDVLYPHLTVTETLVFTALLRLPNSLTRDEKVQHVERVIAELGLSRCRSSMIGGPMLRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTALRILSMIKRLASGGRTVITTIHQPSSRLYYMFDKVVLLSEGCPIYYGPASTALDYFSSIGFSTCVTVNPADLLLDLANGIAPDSKHATEQSESLEQERKVVRETLISAYDKNIATRLKAELCSLEVNNQTITKDACTKSHTKHEQWCTSWWHQFKVLLQRGVRERRHEAFNRLRIFQVVSVAFLGGLLWWHTPESHIQDRVALIFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPDPVTFILSLLVVLYSVVVSQSLGLAFGAILMEVKQATTLASVTTFVFLIAGGYYIQQIPPFIVWLKYMSYSYYCYKLLLGVQYNDDDYYECSKGVLCKVIDFPPIKSVGLNHMWVDLSIMALMLLGYRLVAYLALRRVK* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0471 642 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 293 IPR003439 GO:0005524
Lan17g0471 642 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 31 640 - -
Lan17g0471 642 CDD ABCG_EPDR 38 275 - -
Lan17g0471 642 Gene3D - 59 287 IPR027417 -
Lan17g0471 642 SMART AAA_5 80 270 IPR003593 -
Lan17g0471 642 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 286 IPR027417 -
Lan17g0471 642 ProSitePatterns ABC transporters family signature. 193 207 IPR017871 GO:0005524
Lan17g0471 642 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 31 640 - -
Lan17g0471 642 MobiDBLite consensus disorder prediction 1 28 - -
Lan17g0471 642 Pfam ABC-2 type transporter 381 586 IPR013525 GO:0016020|GO:0140359
Lan17g0471 642 Pfam ABC transporter 71 221 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0471 Lan-Chr17 3600032 3602886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0471 70 269 Calmodulin-binding Proteins AT2G36910 29.187 1.25e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0471 K05681 - gmx:100794774 1137.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0471 17 3600032 3602886 Lan6g0393 6 3151732 3155039 LSH