Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0468 ATGGAAGCAACAGGTTCAGGAACAGTAGCAGTATCAGTTAGAGATGGTGGTGATACATGGAAGGCACATATAGCCATGGTACTAGTGCAACTATTCTATGGAAGCTACCATGTTATTACCAAAGTAGCCCTTAATGTTGGTATATATCAACTTCTCTTTTGTGTCTATAGGGATATCATTGCACTTTCAATTCTTGCTCCCTTAGCTTTTTTTCATGAGAGACGGATACAACTGCCCATTACTAAGGACCTTCTGATTTCATTCTTCTTGCTTGGATTGATTGGGATATTTGGGAACCAGCTTTTGTTTATCATTGGTTTAAGCTATACTAATCCAACCTATGCTTCTACCATACAGTCAGCACTTCCTGTATTTACATTTCTATTTGCAGTAATGATGTGTACAGAAAGAGTGAACTTGCACAGATATGAAGGTTGGGTAAAGGTTGGAGGAACTCTTATCTGTGTTTCTGGTGCCATATTTATGGTTTTGTATCATGGTCCAGCTTTGATAGGATACACAGAAAGTGTCCCTGTAACACAGAGTGAAATAAGTGCCAGAGGTTGGTTTATCAGTGGTTTAGAGAATCTTAGATTAGACCATTTTCATCTTGGGGTTATTTGCTTCATAGGGAACTGCATATGCATGGCTGCTTATATAGCCATTATGGCACCAGTATTAAGAAAGTATCCTGCCAACATATCTGCCACAGCTTATTCATACTTCTTTGGAGCTGTAGTAATGGTGATAGTGTCCTTATTCACGGTTAATGAGTTAAAAGAATGGATTTTGACACCATCAAAAGTACTTGCAGTTCTTTATTCTGGTATTATTGCATCTGCTGTTAATTATGGACTCATTACATGGTGCAACAGGATCTTGGGACCAGCTTTGGTTTCTCTTTATATGCCACTTCAACATGGATTTTCATCCCTCTTGTCTCAAATTTTCCTTGGAAACCCAATTTACTTGGGAAGGTACAACTACTATTTCCAGTTGATGACTTGGAACAAATAG 1017 0.3835 MEATGSGTVAVSVRDGGDTWKAHIAMVLVQLFYGSYHVITKVALNVGIYQLLFCVYRDIIALSILAPLAFFHERRIQLPITKDLLISFFLLGLIGIFGNQLLFIIGLSYTNPTYASTIQSALPVFTFLFAVMMCTERVNLHRYEGWVKVGGTLICVSGAIFMVLYHGPALIGYTESVPVTQSEISARGWFISGLENLRLDHFHLGVICFIGNCICMAAYIAIMAPVLRKYPANISATAYSYFFGAVVMVIVSLFTVNELKEWILTPSKVLAVLYSGIIASAVNYGLITWCNRILGPALVSLYMPLQHGFSSLLSQIFLGNPIYLGRYNYYFQLMTWNK* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0468 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 324 - -
Lan17g0468 338 PANTHER WAT1-RELATED PROTEIN 21 325 IPR030184 GO:0016021|GO:0022857
Lan17g0468 338 Pfam EamA-like transporter family 204 324 IPR000620 GO:0016020|GO:0016021
Lan17g0468 338 Pfam EamA-like transporter family 21 162 IPR000620 GO:0016020|GO:0016021
Lan17g0468 338 PANTHER WAT1-RELATED PROTEIN 21 325 - -
Lan17g0468 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0468 Lan-Chr17 3555182 3557322 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0468 18 275 Nodulin-like Gene Family AT3G45870 59.004 3.90e-102 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0468 - - lang:109330793 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0468 17 3555182 3557322 Lan18g0848 18 13827222 13831598 LSH